Nocardioides bizhenqiangii: SHK19_17125
Help
Entry
SHK19_17125 CDS
T10239
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03420
Nucleotide excision repair
nbi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHK19_17125 (pcrA)
03430 Mismatch repair
SHK19_17125 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_17125 (pcrA)
Enzymes [BR:
nbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHK19_17125 (pcrA)
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHK19_17125 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SHK19_17125 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
WQQ25676
LinkDB
All DBs
Position
complement(3528125..3530626)
Genome browser
AA seq
833 aa
AA seq
DB search
MSQLQPLPGLEGVNPAEEPRTTRRGPTAEELLEGLNGPQQEAVKHAGPPLLVVAGAGSGK
TRVLTRRIAWLISERKAHPGSILAITFTNKAAAEMKERVADLVGGRAKIMWVSTFHSACV
RILRKEAEHLGYERLKSNFSIYDAQDQKRLITLVCNDLDLDPRRYQPGPVLHWISNHKNE
LRDPDEVRADARNSIEESYSAAYSLYQRRLREANALDFDDLIMETVRLFQAHPEIRETYR
RRFRHVLVDEYQDTNHAQYALIHQLCGQSLEEPIETAYDTDADDRVPPAELMVVGDADQS
IYAFRGANIRNILDFEQDFPDARTILLEQNYRSTQTILSAANAVIGHNQGRKDKRLWSDA
GDGERIVGYVADDQHDEARFVSDEIDKLTDSGYRAGDVAVFYRTNAQSRVFEEIFIRTGL
PYKVVGGVRFYERREVRDALAYLRMLVNPDDQVSLRRILNTPKRGIGDRAVECVNDLANR
EQITFWEALQRADEAPGLATRSQSNIEGFVLLVTELQSMVEGGERPDVILETVLDRSGYL
ASLEASDDPQDETRVENLGELVAVAREFAEDPVAAPSADPADVDAGLVEPGLADFLERVA
LVADTDQIPDAPEDDPDAPPDQGVVTLMTLHTAKGLEFPVVFLTGLEDGVFPHSRSLGDR
PELEEERRLAYVGITRARQRLYVSRAVVRSAWGAPAHNPPSRFIGELPVDLVDWRRTEAD
QTRWARPTFASDSDSTYASSGSGQGFGNRLGSPTAAGRRNFTSAAARADAAAKAKPARPI
PVLEPGDRVTHDSFGLGTVVSVEGQAEKSVASIDFGSDGVKRLLLRYAPVEKL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttgcagccgctgcccggcctcgagggcgtcaatcccgctgaagagccgcgt
acgacgcggcgcgggccgaccgcggaagagctcctggagggcctcaacgggccgcagcag
gaggcggtcaagcacgccgggccgccgttgctggtggtggccggcgccgggtcgggcaag
acccgggtgctgacccggcggatcgcgtggctgatctccgagcgcaaggcccatccgggc
tcgatcctggcgatcaccttcaccaacaaggccgccgcggagatgaaggaacgggtggcc
gacctggtcggcggccgcgccaagatcatgtgggtcagcaccttccactccgcctgcgtc
cggatcctgcgcaaggaggcggagcacctcggctacgagcggctgaagtcgaacttctcg
atctacgacgcccaggaccagaagcggctgatcaccctggtctgcaacgacctcgacctc
gacccgcgccgctaccagcccggcccggtgctgcactggatcagcaaccacaagaacgag
ctgcgtgaccccgacgaggtcagggccgacgcccgcaacagcatcgaggagagctactcg
gcggcgtactccctctaccagcgccggctccgcgaggccaacgccctcgacttcgacgac
ctgatcatggagacggtccggctgttccaggcccacccggagatccgcgagacctaccgg
cggcggttccggcacgtgctggtcgacgagtaccaggacaccaaccacgcccagtacgcc
ctcatccaccagctctgcggacagagcctcgaggagccgatcgagactgcgtacgacacg
gacgccgacgaccgggtgccgcccgcggagctgatggtggtcggcgacgccgaccagtcg
atctacgcgttccgcggcgccaacatccgcaacatcctcgacttcgagcaggacttcccc
gacgcgcgcaccatcctgctggagcagaactaccgctcgacgcagaccatcctcagtgcc
gccaacgcggtcatcggccacaaccagggccgcaaggacaagcggttgtggtccgacgcc
ggcgacggcgagcggatcgtcggctacgtcgccgacgaccagcacgacgaggcgaggttc
gtctccgacgagatcgacaagctgaccgacagcggctaccgcgcgggcgacgtggcggtc
ttctaccgcaccaacgcgcagtcccgtgtgttcgaggagatcttcatccgcaccggactg
ccctacaaggtcgtgggcggggtcaggttctacgagcggcgcgaggtgcgcgacgcgctc
gcctacctgcggatgctcgtcaatcccgacgaccaggtgtcgctgcgccggatcctcaac
accccgaagcgaggcatcggcgaccgcgcggtcgagtgcgtcaacgacctggccaaccgc
gagcagatcacgttctgggaggcgctccagcgcgccgacgaggcgcccggccttgcgacc
cgcagccagtccaacatcgagggcttcgtcctgctggtgaccgagcttcagtcgatggtc
gaggggggcgagcggccggacgtgatcctcgagacggtgctcgaccggtccggatacctc
gcgtcgctggaggcgtccgacgacccgcaggacgagacccgggtggagaacctcggcgag
ctcgtggccgtcgcccgggagttcgccgaggacccggtcgccgcgcccagcgccgacccg
gccgacgtcgacgccggactggtcgagccggggctcgcggacttcctggagcgggtggcg
ctggtcgccgacaccgaccagatccccgacgcaccggaggacgaccccgacgcgcccccc
gaccagggggtggtgaccctgatgacgctccacaccgccaagggcctggagttcccggtc
gtcttcctcaccggtctcgaggacggcgtgttcccgcactcccggtcgctgggcgaccgg
ccggagctggaggaggagcggcggctggcctacgtcggcatcacccgcgctcgtcagcgg
ctctacgtctcccgcgcggtggtccgctccgcctggggagcgcccgcccacaacccgccg
tcgcggttcatcggcgagctgccggtcgacctcgtcgactggcgccgcaccgaggccgac
cagacccgctgggcgcgtccgacgttcgcgagcgacagcgactcgacgtatgcctcgagc
ggctcgggacagggcttcggcaaccggctcggctcgccgaccgctgccggccgccgcaac
ttcacctctgccgccgcccgggccgacgccgcggcgaaggccaagcccgcccgtccgatc
ccggtgctcgagccgggcgaccgggtcacccacgacagcttcggactcgggaccgtggtg
tccgtcgagggccaggcggagaagtccgtcgcgtcgatcgacttcggctccgacggcgtc
aagcggctgctgctgcgctacgcaccggtagagaagctgtag
DBGET
integrated database retrieval system
