Nocardioides bizhenqiangii: SHK19_17445
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Entry
SHK19_17445 CDS
T10239
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHK19_17445 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbi03019
]
SHK19_17445 (groL)
03110 Chaperones and folding catalysts [BR:
nbi03110
]
SHK19_17445 (groL)
03029 Mitochondrial biogenesis [BR:
nbi03029
]
SHK19_17445 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nbi04147
]
SHK19_17445 (groL)
Enzymes [BR:
nbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SHK19_17445 (groL)
Messenger RNA biogenesis [BR:
nbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SHK19_17445 (groL)
Chaperones and folding catalysts [BR:
nbi03110
]
Heat shock proteins
HSP60 / Chaperonin
SHK19_17445 (groL)
Mitochondrial biogenesis [BR:
nbi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SHK19_17445 (groL)
Exosome [BR:
nbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SHK19_17445 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SHK19_17445 (groL)
Exosomal proteins of breast cancer cells
SHK19_17445 (groL)
Exosomal proteins of colorectal cancer cells
SHK19_17445 (groL)
Exosomal proteins of bladder cancer cells
SHK19_17445 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Rv2466c-like
Motif
Other DBs
NCBI-ProteinID:
WQQ25738
LinkDB
All DBs
Position
complement(3599273..3600898)
Genome browser
AA seq
541 aa
AA seq
DB search
MPKILEFDENARRALERGVDKLADTVKVTLGPKGRYVVLDKKWGAPTITNDGVTVAREIE
LDDPFENLGAQLTKEVATKTNDIAGDGTTTATVLAQAMVHEGLRAVAAGANPMGVKRGMD
AAATAVSDALLAAAREVETKEDMASVATISSRDSHIGELLAEAFDKVGKDGVITVEESNT
MGTELEFTEGMQFDKGYISAYFVTDPERMEAVIDDPYILLHQGKISAIADLLPLLEKVIQ
AGKPLFILAEDVDGEALSTLVVNKIRGTFTAVAVKSPAFGDRRKAMMQDIAILTGGQVIA
PEVGLKLDQVGLDVLGQARRIVVTKDSTTIVDGAGDPAQVEGRVNQIKQEIEAADSDWDQ
EKLQERLAKLAGGVCVIKVGAATEVELKEKKHRIEDAVSATRAAIEEGIVPGGGSALIHA
VSVLDKDLGLTGDEAVGVRIVRKSADEPLRWIAENGGVNGYVVTTKVRELGVGNGYNAAT
EEYGDLVAQGVLDPVKVTRSALVNATSIAAMLLTTETLVVDKPEEEEPDAAGHGHGHGHG
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatcctggagttcgacgagaatgcccggcgcgctctcgagcgcggcgtcgac
aagctcgccgacacggtcaaggtgaccctcggccccaagggccgctacgtcgtcctcgac
aagaagtggggcgcgcccaccatcaccaacgacggtgtgaccgtcgcgcgcgagatcgag
ctcgacgacccgttcgagaaccttggtgcccagctcaccaaggaggtcgccaccaagacc
aacgacatcgctggtgacggcaccaccaccgcgaccgtgctcgcgcaggcgatggtgcac
gagggcctccgcgcggtggccgccggcgccaacccgatgggtgtcaagcgcggcatggac
gccgccgcgaccgcggtgtccgacgcactgctcgccgccgcccgcgaggtggagacgaag
gaggacatggccagcgtggccacgatctccagccgcgacagccacatcggcgagctgctc
gccgaggccttcgacaaggtgggcaaggacggtgtgatcaccgtcgaggagtccaacacc
atgggcaccgagctcgagttcaccgagggcatgcagttcgacaagggctacatctcggcc
tacttcgtcaccgacccggagcggatggaagcggtcatcgacgacccctacatcctgctg
caccagggcaagatctccgcgatcgccgacctgctgccgctgctcgagaaggtcatccag
gccggcaagccgctgttcatccttgccgaggacgtcgacggcgaggcgctctccacgctc
gtggtcaacaagatccgcggcaccttcaccgcggtcgcggtgaagagcccggcgttcggt
gaccggcgcaaggcgatgatgcaggacatcgcgatcctgaccggcggtcaggtcatcgcg
cccgaggtcggcctcaagctcgaccaggtcgggctcgacgtgctcggccaggcccgccgc
atcgtggtcaccaaggacagcaccacgatcgtcgacggcgccggcgacccggcgcaggtc
gagggtcgcgtcaaccagatcaagcaggagatcgaggcggccgacagcgactgggaccag
gagaagctccaggagcgtctcgccaagctcgccggcggcgtctgcgtgatcaaggtcggc
gccgccaccgaggtggagctcaaggagaagaagcaccgcatcgaggacgccgtgtcggcg
acccgggccgcgatcgaggagggcatcgtccccggcggtggctctgcgctcatccacgcg
gtctcggtgctcgacaaggacctcgggctgaccggcgacgaggcggtcggtgtccgcatc
gtccgcaagtcggccgacgagccgctgcgctggatcgccgagaacggcggcgtcaacggc
tacgtcgtgacgaccaaggtgcgcgagctcggcgtcggcaacggctacaacgcggccacc
gaggagtacggcgacctggtcgcccagggcgtcctcgacccggtcaaggtgacccgctcg
gcgctggtcaacgcgacctcgatcgctgcgatgctgctgacgaccgagaccctggtcgtc
gacaagcccgaggaagaggagcccgacgcggccggtcacggccacggtcacggccacggg
cactga
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