Nocardioides bizhenqiangii: SHK19_17675
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Entry
SHK19_17675 CDS
T10239
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SHK19_17675 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_17675 (xseA)
Enzymes [BR:
nbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SHK19_17675 (xseA)
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SHK19_17675 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
WQQ25784
UniProt:
A0ABZ0ZPV1
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All DBs
Position
3646294..3647529
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AA seq
411 aa
AA seq
DB search
MALETSLEKPAPVRTIANAITGWIDRLGVVWVEGQVAQVSRRPGVNTVFMTLRDSVADIS
VPVTCSRVLFDGLEPPLVEGASVVIQAKPSYYANRGTFSLYARDIRMVGLGELLARLEQR
RQLLAAEGLFALERKRRLPFLPGRVGLITAPRSAAEKDVVENATRRWPGVEFETVYAAMQ
GTRSALEVIEALERLDGRADVDVIVIARGGGSVEDLLPFSDEGLVRAVAKAGTPVVSAIG
HEPDTPLLDLVADVRASTPTDAAKLTVPDVATETTGVAHARDRLRRAVRTQLAREEAGLH
ALRSRPALADPRTLLDVRADELVGLCDRIRRTLGHRLDRAADDIAHQRARARALSPLATL
QRGYAVLQDDAGHVVTSAAGVDAGAAMSVRVADGRIHVTTTHAELEETHGE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtggccctggagacctccctcgagaaaccggctccggtccggacgatcgccaacgcgatc
acgggctggatcgaccggctcggcgtggtgtgggtggagggtcaggtcgcgcaggtgagc
cgccggccgggcgtcaacacggtgttcatgacgctgcgcgactcggtcgcggacatctcg
gtgccggtgacctgctcgcgggtgctcttcgacgggcttgagcctcccctggtggagggt
gcgagcgtcgtgatccaggcgaagccgtcctactacgccaaccgcgggacgttctcgctc
tatgcccgcgacatccggatggtcgggctcggcgagctgctcgcccggctggagcagcgt
cgtcagctgctggcggccgaagggcttttcgcgctcgagcgcaagcgccggctgccgttc
ctgcccggtcgggtcgggctgatcaccgctccgcgctcggcggccgagaaggacgtggtc
gagaacgcgacccgtcgctggccgggcgtggagttcgagaccgtctatgccgcgatgcag
gggacgcggtcggcgctcgaggtgatcgaggcgttggagcggctcgacggccgggcagac
gtcgacgtcatcgtgatcgcccgcggcggcggctcggtcgaggacctgctgccgttctcc
gacgagggcctggtccgagccgtcgcgaaggccggcacaccggtggtgtccgcgatcggc
cacgagcccgataccccgctgctcgacctggtcgccgacgttcgggcgtcgacgccgacc
gacgcggcgaagctgaccgtccccgacgtcgcgaccgagaccaccggtgtcgcccacgcc
cgtgaccggctgcggcgcgccgtccggacccagctcgcccgcgaggaggcggggctccac
gcgctgcgctcccggccggcgctcgccgacccgcgcaccctgctcgacgtccgcgccgac
gagctcgtcggcctctgcgaccggatccgccgcacgctcggccatcggctcgaccgggcc
gccgacgacatcgcccaccagcgcgcgcgggcccgcgcgctctctcccctggcgacgctg
cagcgcggctacgccgtgctccaggacgacgccggccacgtcgtcacctcggccgccggg
gtggatgcgggggcggcgatgagcgtccgcgtcgccgacggcaggatccatgtgactacc
actcacgcagagctcgaggagacccatggcgagtga
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