Nocardioides bizhenqiangii: SHK19_20445
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Entry
SHK19_20445 CDS
T10239
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SHK19_20445 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_20445 (recC)
Enzymes [BR:
nbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SHK19_20445 (recC)
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SHK19_20445 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WQQ26317
LinkDB
All DBs
Position
complement(4224689..4228021)
Genome browser
AA seq
1110 aa
AA seq
DB search
MTLHLHRAARTDQLADQLGALLASPLADPFAAEVIVVPAKGVERWLSQRLSHRLGTAPDR
GDGVCAGVDFRSPRSLFGVVSGRPDDDPWSADALVWPLLHVIDAAVGEPWAATLARHLGH
HLEGDAGEVRRGRRFATARRLAGLFASYAGQRPELIAGWAAGLDTDGAGEPIPDDLRWQP
ELWRRLAAAVEGPDPVRRQADAIERLRADPTTVDLPSRVNLFGHTRLATGDLALLDALAA
DRAVHLWLPHPSAALWSRLSDLAGVVPRIEDRSHLQVGHPLLATLGRDTRELQRTLATVA
YVDELPAAEPGAPETLLGWLQADLRANAPGPAAARQLRPDDRSVQLHACHGPARQVEVLR
EVLLGLLADDPDLEPRDMLVMCPDIESYAPLLSAAFGLADVVGPEGHPAHRLRVSLADRA
LDQTNPLLAVVARLLDLAGGRAGVGDVLDLAHAEPVRRRFGLRADDLDLLATWVQQAGVK
WGFDATHRAEFGLDDYDDNTWRTGLDRLLTGVALSDDSDIMLGGTLPLDDVGSGDVDLIG
RLTELVARLEAVTDRLVGTHSLDHWLQAIEDGVGALTAVRSTDSWQLGQVQRELDGLRSA
AGVDVDLRLPDVRAMFSDRLAGRPTRANFRTGVLTVSTLVPMRSVPHRVVCLLGLDDGIF
PRVGVTDGDDVLARRPLTGERDPRSEDRQLLLDAVLAATDTLVITYTGANEYTGQGRSPA
VPVGELLDALDLTATTGDGRQVSQAITIAHPLQPFDRRNLTAGCLVPDVPFAFDRFALAG
ARAVERERDEVPPFLAGALAPPDPGDVALDDLVDFFGGPVKGFLKQRLGIALPREDEPVD
DRIPITLEPLEEWAVGDRVLGDLMRGHHPDAAVERERRRGVVPPGELGERTLQKVVGRAR
PLAAAALTHIGSAPRAVDVDVDLGDGRRLRGTVPELYGDLLVRVSYSRLGPKHRLQSWVK
LLALVSSDEDRPWRSLTLGRPEGWGRADLDASRLGPLDHRAHAWLRDLVAVRDEGLVAPL
PLPLKTSLQYARHRRTQMAPEVALDKVGFLWRKDGKFPGEVADAEHVLVWGERSPLPGAS
GPGEGAERSRLGALAMRVWDPLLESEVGSW
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccacctccaccgcgctgcgcgcaccgaccagctcgccgaccagctcggcgcg
ctgttggcgtcgccgctggccgacccgttcgcggccgaggtgatcgtggtgccggcgaag
ggggtcgagcgctggctgtcccagcggctctcgcaccggctaggcaccgcgcctgatcgc
ggcgacggcgtgtgcgcaggggtcgacttccggagcccgcgctcgctgttcggggtcgtc
tccgggcgccccgacgacgatccctggtcggccgatgcgctggtctggccgcttctccac
gtcatcgatgctgccgtcggcgagccgtgggcggcgaccctcgcgcggcacctcggccac
cacctcgagggtgatgcgggcgaggtgcggagggggcgccggttcgcgaccgcgcgccgg
ctggcgggcctgttcgcgtcgtacgccggacaaaggccggagttgatcgccggctgggct
gccggtctcgacacggacggcgcgggcgagccgatcccggacgacctgaggtggcagccc
gagctctggcgtcggctcgcggcagccgtcgaaggaccggacccggttcgtcggcaggcg
gacgcgatcgaacggctgcgcgccgatcccacgacggtcgacctgccgtcgcgcgtcaac
ctgttcggccacacccggctggccacgggcgacctggctctgctcgacgcgctggccgcc
gaccgcgccgtccacctgtggctcccgcacccgtcggccgcgctgtggtcacggctctcc
gacctcgccggggtcgtgccgcgcatcgaggaccggtcgcacctgcaggtcggtcacccg
ctgctcgcgacgctcggccgcgacaccagggagctgcagcggacgctggcaaccgtggcc
tacgtcgacgaactgccggccgccgagcctggtgcgcccgaaaccctgctcggctggctc
caggccgacctccgggccaacgccccgggcccggccgcggcgcgccagctgcgaccggac
gaccggtcggtccagctccacgcgtgccacggaccggcccggcaggtcgaggtgctgcgc
gaggtgctgctcggcctgctcgcggacgacccggacctcgaaccccgcgacatgttggtg
atgtgccccgacatcgagagctacgccccgttgctgtcggcggcgttcggcctcgccgac
gtggtggggccggagggccacccggcccaccggctgcgggtgagcctcgccgaccgggcg
ctcgaccagaccaacccgctgctggccgtggtcgcccggctgctcgatctcgccggcggc
cgggccggtgtcggcgacgtgctcgacctggcgcacgcagagcccgtgcgccggaggttc
ggtctccgcgccgacgacctcgacctgctcgcgacctgggtccagcaggccggagtgaag
tggggcttcgacgcgacgcaccgggcggagttcggcctcgacgactacgacgacaacacc
tggcggaccggcctcgaccggttgctcaccggggtggcgctgtccgacgacagcgacatc
atgctcggcgggacgctgcccctcgacgacgtcggcagcggtgacgtcgacctgatcggg
cggctgacggagctcgtcgcccggctcgaggcggtcaccgaccggctggtcggcacgcac
tccctcgaccactggctgcaggccatcgaggacggcgtcggtgcgttgacggcagtccgg
tcgaccgactcctggcaactcgggcaggtgcagcgcgagctcgacgggctgcgctccgcc
gccggggtcgacgtggacctccggctccccgacgtgcgcgcgatgttctccgaccgactc
gccggccggcccacccgcgccaacttccgcaccggagtgctgacggtctcgacgctggtg
ccgatgcggtccgtgccccaccgggtggtctgcctgctcggcctcgacgacgggatcttc
ccgcgcgtcggcgtgaccgatggcgacgacgtgctggcccgccggccgttgacgggcgag
cgcgacccgcgaagcgaggaccggcagctgttgctcgacgccgtgctcgccgcgaccgac
accctcgtcatcacctacaccggcgccaacgagtacaccggccagggccggtcgccggcc
gtgcccgtcggagagctgctcgacgcgctcgatctcaccgccaccaccggcgatgggcgg
caggtctcccaagcgatcacgatcgcccacccgttgcagccgttcgaccggcgcaacctc
acggcggggtgcctggtacccgacgtgcccttcgcattcgaccggttcgccctggcgggt
gctcgcgcggtcgagcgggagcgcgacgaggtgccgccgttcctcgcgggcgcgctggcg
cctcccgatcccggggatgtcgccctcgacgacctggtcgacttcttcggcggtccggtc
aagggcttcctgaagcagcggctcgggatcgcgctgcctcgcgaggacgagccggtcgac
gaccggatcccgatcacgctcgagccgctggaggagtgggcggtgggcgaccgggtcctc
ggcgacctgatgcgtggccaccatcccgacgccgccgtcgagcgggagcgtcgccgcggc
gtcgtacccccgggcgagctcggcgagcgcaccctgcagaaggtcgtcggccgcgcgcgg
ccgctcgcggccgcagcactcacccatatcggcagcgcaccgagggcggtcgatgtcgac
gtcgacctcggggacggacgccggctccgcgggaccgtcccggagctgtacggcgacctg
ctggtgcgggtcagctactcccggctcggtcccaagcaccggctgcagtcgtgggtcaag
ctgctcgcgctcgtgtcgagcgacgaggaccgtccgtggcggagcctcacgctgggccgg
ccggagggatggggacgtgccgacctcgacgcgtcgcggctcggcccgctcgaccaccgg
gcgcacgcgtggctgcgagacctggtcgcggtccgcgacgaaggactcgttgcgccgcta
ccgctgccgctcaagacgtcgctgcaatacgcccgccaccggcgcacgcagatggctccg
gaggtcgcgctcgacaaggtcggcttcctctggcgcaaggacgggaagttccccggcgag
gtcgccgacgccgagcacgtcctcgtgtggggcgagcgctcgccgttgccgggtgcgtcc
ggtccgggtgagggcgcggagaggtcgcggctcggtgccctcgcgatgcgggtctgggac
cccctcctcgagagcgaggtggggagctggtga
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