Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_000330
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Entry
HXK95_000330 CDS
T09858
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
Pathway
nbj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HXK95_000330 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbj03400
]
HXK95_000330 (mutM)
Enzymes [BR:
nbj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HXK95_000330 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HXK95_000330 (mutM)
DNA repair and recombination proteins [BR:
nbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HXK95_000330 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Ribosomal_S13
Zn_ribbon_6
RNHCP
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QWB91656
UniProt:
A0A9E6MTF5
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All DBs
Position
61374..62258
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AA seq
294 aa
AA seq
DB search
MPELPEVETVVRGLNRLILKKKISKVKHDWPKSFPNAPKDVEDFMVGAEISKVSRRGKAI
ILKLNNEYTLVTHLRMTGQMVYRGEENWGAGHPNEDFLNDLPNKSTRVEIDFEDGTKLFF
NDQRKFGYMKLLPDFEVELLPFFQKLGPEPLEDNFTVEVLKKQLSRKRKSMVKPVILDQS
VIAGVGNIYADEALWRAKIHPETRIEDLSESDFVKLHEAIRFVMNKSIEKGGSTDRNYVN
ADGSRGNYLEYAAVYHKDGQPCKRCGTEISKIRVGGRGTHFCPNCQKIKKGLEK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaggtagagactgttgtcagaggattgaatcgattaatcttgaaa
aagaaaatttcgaaagtaaaacacgattggcctaaaagttttccaaatgcaccaaaagat
gttgaagattttatggttggtgctgagatttcgaaagttagtcgtcgaggaaaagctatt
attttaaaattaaataatgaatatacgcttgtgactcatcttcgaatgacgggtcaaatg
gtttatcggggcgaagagaactggggagccggtcacccgaatgaagactttcttaatgat
ctaccgaataaatcaactcgtgttgaaattgattttgaagatggaactaaattatttttt
aatgatcaacgcaaatttggctatatgaaattgttgccagattttgaagttgaactttta
ccatttttccaaaaattagggccagaaccgttagaggataattttacggtggaagtttta
aagaagcaactttcaagaaaaagaaaaagtatggtcaagccagtaattttagatcaaagt
gttattgccggtgtggggaatatttacgccgatgaagctttgtggcgagcgaaaattcat
cctgaaactcgaatcgaagatctttcggaatctgattttgtaaaactgcacgaagctatt
cggtttgtgatgaataaatcgatcgaaaagggcggttcaacagatcgaaactatgttaat
gctgatggttcacgtggaaattatcttgaatatgctgcagtttatcacaaggatggccaa
ccttgcaaaagatgtggaacggaaatttcgaaaatccgagttggcggtcgaggcacacat
ttttgcccaaattgtcaaaaaataaagaaagggcttgaaaaataa
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