Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_000840
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Entry
HXK95_000840 CDS
T09858
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
Pathway
nbj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HXK95_000840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbj03400
]
HXK95_000840
Enzymes [BR:
nbj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HXK95_000840
DNA repair and recombination proteins [BR:
nbj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HXK95_000840
Prokaryotic type
HXK95_000840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
QWB91743
UniProt:
A0A9E6MTG9
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All DBs
Position
153539..154201
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AA seq
220 aa
AA seq
DB search
MKITSWREFIENEAEKPYFKKLWQKVEHERVSKEIFPVREEIFSCFEKCPLEKTKVVIIG
QDPYHGVGQAHGMSFSVKKGVRIPPSLQNIYKELQSDLGIEPADNGFLESWAEQGVLLLN
TSFSVEKGKPASHANFGWMEFSEHVLDFLNDCEHPLVFILWGAHAQKVGARITNPKQLKI
ESAHPSPFSAHRGFFGSKPFSKANKFLEQNGETPIDWRVR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacctcttggcgtgaatttattgagaacgaagctgaaaagccatattttaaa
aagctgtggcaaaaagttgaacacgagcgtgtttcgaaagagatttttccggtaagagaa
gagattttttcttgtttcgaaaaatgtccgcttgaaaaaactaaggttgtgattattggt
caagatccttatcatggtgttgggcaggcgcacggaatgagtttttcggttaaaaaaggt
gttagaattccgccaagtttgcaaaatatctacaaagagcttcaaagcgatttaggtatt
gagccagccgataatggttttttggaatcttgggcggagcagggtgttttgttgttaaac
acttcttttagtgttgaaaaaggtaaacctgcgagccatgcgaattttggttggatggag
ttttcggaacacgttttagattttttgaatgattgtgaacacccactagtgtttatttta
tggggagcgcatgcgcaaaaagttggcgctcgaataacaaatccaaaacaacttaaaatc
gaaagcgcgcatccttcaccattttcggcgcaccgtggattttttggctcaaaaccgttt
tcgaaagcgaacaaatttttagaacaaaatggcgaaacaccgattgactggcgagtgcgc
taa
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