Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_001225
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Entry
HXK95_001225 CDS
T09858
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
Brite
KEGG Orthology (KO) [BR:
nbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nbj03009
]
HXK95_001225 (der)
Ribosome biogenesis [BR:
nbj03009
]
Prokaryotic type
GTPases
HXK95_001225 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
Ras
Roc
SRPRB
GBP
ABC_tran
AAA_24
PduV-EutP
Gtr1_RagA
cobW
TniB
MMR_HSR1_Xtn
HGD-D
Motif
Other DBs
NCBI-ProteinID:
QWB91819
UniProt:
A0A9E6MUT3
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All DBs
Position
complement(223723..225183)
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AA seq
486 aa
AA seq
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MSKNLPKVAIIGQANVGKSSLFNRMIRAQQAVVAREAGTTRDSVLGKVKYKNQAFWLIDT
AGLKDPNDEFEATIQEQIQDAVDASELILVVLDSTKPFSNEDRLIAKKALKSRKPVILVL
NKTDLKGNLPNEEFLRLGVKPIIRTSAEHNAGVDELLTEIAENIPKVKEEKQPEDVIRVA
LVGRPNAGKSYLFNTMAGKQQAIVANVAGTTRDTNRTTIRFNEKTIEIIDTAGMRKPGKQ
EVGIEKFSVLRTLNAIDEADICLLLMDANELNTQLDQRIAGLINDAGKGMVIVVSKWDSV
EGKDAYTRDALAPRIAYYFKFTPWAPLIFTSSKTGQNVTKIYDLILKVHRNRARQAKTSI
LNQLLQKATQAHPPAGLKNTHPKLRYISQSDSNPPWFIIHGSNLKFVHWSYKRYLERLIR
ENFDYSGTPIKFSFRDEKQIKENRARISAGKKVIDKASGALKKAADTQNKRERKRDEKLA
RIQKNQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatctcccaaaagttgcaattattggtcaagcgaacgttggaaaatcttcg
ctttttaaccgaatgattcgtgctcaacaagccgttgttgcacgagaagccggaacaacg
cgcgatagcgttcttggtaaagttaaatataaaaatcaagccttttggctaattgatacc
gccggattaaaagatcctaacgatgaatttgaagcgacaattcaagaacaaattcaagat
gcagttgacgccagtgaattaattttggtggtccttgatagcactaaacctttttcgaat
gaagatcgcttgattgcaaaaaaggccttaaaatctcgaaagcctgtaattttggttcta
aataaaaccgacctaaaagggaatttaccaaatgaagaatttttgcgccttggtgttaaa
ccgattattcgaacttctgccgaacacaatgctggcgttgatgaacttctaaccgaaatt
gctgagaatatcccaaaagttaaagaagaaaaacaacccgaagatgtgattcgtgtagct
ttggttggtcgcccaaacgctggaaaatcttatctctttaatacaatggctggaaaacag
caggcgattgtagcgaacgttgcaggaacaacgcgtgatacaaaccgcaccacaattcgt
tttaacgaaaaaaccatcgaaattatcgacacagccggaatgcgcaaacccggaaaacaa
gaagttggaattgaaaaattctcagtacttcgaactttgaatgcaattgatgaagctgat
atttgtttgcttttaatggacgcaaacgagcttaacacacagctcgaccaacgaattgcc
ggcttaattaacgacgccggaaaagggatggtcatcgtggtttcgaaatgggatagcgtt
gagggaaaagatgcttatactcgtgatgctttggcgccacgaatcgcatactatttcaaa
tttacaccttgggcaccactaatcttcacgagttcgaaaactggccaaaatgtgactaaa
atttatgatttaattctaaaagttcaccgcaaccgtgcaagacaagcaaaaacctcaatc
ttgaatcagcttttacaaaaagcaacccaagctcatccgccagcaggtttgaaaaatacg
catccaaaattgcgctatatttcacaaagcgatagcaatccaccttggttcattatccac
ggctcaaacttaaaatttgttcactggagctataaacgctatttagagcgcttgattcgc
gagaattttgattattccggaacgccaattaagttttcttttagagacgaaaaacaaatt
aaagaaaaccgcgcaagaatttcagctggtaaaaaagttatcgataaagcttcgggtgca
cttaaaaaagctgccgacacgcaaaataaacgcgaacgcaaacgcgacgaaaaacttgct
cgaattcaaaaaaatcaataa
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