Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_001285
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Entry
HXK95_001285 CDS
T09858
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
Pathway
nbj03420
Nucleotide excision repair
nbj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HXK95_001285
03430 Mismatch repair
HXK95_001285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbj03400
]
HXK95_001285
Enzymes [BR:
nbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXK95_001285
DNA repair and recombination proteins [BR:
nbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HXK95_001285
MMR (mismatch excision repair)
Other MMR factors
HXK95_001285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
NADH_B2
Motif
Other DBs
NCBI-ProteinID:
QWB91831
UniProt:
A0A9E6SW23
LinkDB
All DBs
Position
complement(237411..239558)
Genome browser
AA seq
715 aa
AA seq
DB search
MDITKGLNKNQKEAVETLSGPMLILAGAGSGKTKTLTHRIANLIAHGVASETILAVTFTN
KAAREMRERLADLLNRDANDRFFMPWMGTFHGICVKILRLKGEAIGVAPNFVIYDEDDRR
SLIKKIMKELQIDEKSLKPQSVSSAISNAKNQLLTAEEFANGANWGFEQKVSEIFLRYEK
ERNKANALDFDDLLFETVKLLQQNKEIREFWQNKFNHILIDEYQDTNAAQYAIIKMIVNA
ERNICVVGDDWQSIYSWRGADFTNILNFERDYKGAKVIKLEQNYRSTENILNAAHNVISK
NHNRTDKKLFTELGKGEPVLVQSARDESEEAAKIAGQIFSFKTVGARKFSDFAILYRTNA
QSYNFEKAMIRYQIPYKIFGGTRFYDRKEIKDILAYLRVIYNPLDRVAFERIVNVPARGL
GAVSLSKFLNWQSSNSLDLISSLLQAGELSTLTSRARNSLVNLGEIFRECQILSENSSNP
SEIIERILERTNYGKNEKLTENEATERSEYLSTLVSEAKNYADLASFLEDAALMSSADAK
SGDEVNLMTLHAAKGLEFPVVFLAGMEEGIFPHSRVFDTGEDDLEEERRLCYVGMTRARE
ELILSYAESRAVFGQRNYSSPSRFITDAELELPKKNFGGWNDFSKEEEDYSQEVSFEEFD
DFYSDECGLQIGDRVKSPAFGAGIVKDIDGLAVEIEFGNGKIRKLNAEFARLEKL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatattacgaaaggcttaaataaaaatcaaaaagaggcggtggaaactttaagtggg
ccaatgctaattttggcgggcgcgggaagcggtaaaaccaaaactttaacgcaccgaatt
gcgaatttaattgcgcacggcgtagcgagcgaaacgattttagcggtgactttcaccaac
aaagccgcgcgagaaatgcgtgaacgtttggcggatttgcttaaccgcgacgcgaacgac
cgattttttatgccttggatgggaacttttcacggaatttgcgtgaagattttgcgactt
aaaggtgaagcgattggcgtggcgccaaattttgtgatttatgatgaggacgaccgacga
agcttgattaaaaaaatcatgaaagaattacaaattgacgaaaaaagtttgaaaccgcaa
agtgtttcaagcgcaatttcgaatgcaaaaaatcagcttttaacggcagaagaatttgca
aacggcgcaaactggggttttgagcaaaaagtttctgagatttttttgcgctacgaaaaa
gaacgaaacaaagcgaatgcgctagattttgatgatttgcttttcgaaacagtaaaatta
cttcagcaaaataaagaaattcgcgaattttggcaaaataaatttaatcatattttgatt
gacgagtatcaggatacgaacgcggcacaatatgcgattataaaaatgatcgtgaacgcc
gagcgaaatatttgcgtggttggtgatgactggcagagcatttattcttggcgtggtgca
gattttacgaatattttgaatttcgaaagagattacaagggtgcaaaagtaataaaactg
gagcaaaattatcgttcaactgagaatattttgaacgccgcacacaacgtgatttcgaaa
aaccacaaccgaaccgataaaaaactctttaccgaactcggtaaaggcgaacccgtttta
gtgcaaagtgcgcgcgatgaaagcgaagaagcggcgaaaattgcaggccagattttcagt
tttaaaactgttggtgcacgaaaatttagcgatttcgcaattctttatcgcacaaacgcg
caaagctataactttgaaaaagcaatgattcggtatcaaattccgtataaaatttttggt
ggaacacgcttttatgaccgcaaagaaattaaagatattttggcttatttgcgagtgatt
tataatccactcgaccgcgtggcttttgagcgaattgtgaatgtgccagcgcgcggtttg
ggtgcagtgagcctttcgaaattcttgaactggcaaagttcgaatagtttggatttgatt
tcgagcttacttcaagctggagaactttcaaccttaacttcacgcgcacgaaattcatta
gtaaatctgggcgagatttttcgcgaatgccaaattttaagcgaaaattcatcaaacccg
agcgaaattattgagagaattttagaacgaacaaattacggtaaaaatgaaaaattaact
gaaaacgaagcaactgaacgaagtgaatatctttcaaccttagtaagtgaagcaaaaaat
tacgcagatttggcaagctttttggaagatgccgcactgatgagttcagctgatgcaaaa
agtggcgatgaagtgaatttaatgactttgcacgccgcaaaaggtttggagttcccggtg
gtatttttggcgggaatggaagaagggatttttccgcacagccgagtttttgacactggt
gaagatgatttagaagaagaacgccgactttgctatgtgggaatgacgcgcgcacgagaa
gagttaattttgagctatgctgaatcgcgagctgtttttggtcaacgaaattattctagt
ccgagccgttttattactgatgccgagctagagctaccaaaaaagaattttggcggctgg
aatgatttttcgaaagaagaagaagattatagccaagaggttagttttgaggaatttgat
gatttttattctgatgaatgcggcttgcaaattggcgatcgtgtgaaaagccccgctttt
ggtgccggtatcgttaaagatatcgatggattggcggttgaaattgagtttggcaacggc
aaaattcgaaaactaaacgctgaatttgcccgcctcgaaaagctctaa
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