Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_001570
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Entry
HXK95_001570 CDS
T09858
Name
(GenBank) ATP-dependent helicase
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
AAA_30
DEAD
GREB1_C
Motif
Other DBs
NCBI-ProteinID:
QWB91885
UniProt:
A0A9E6MTP7
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Position
complement(297742..301263)
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AA seq
1173 aa
AA seq
DB search
MNDFQKIFEKKYKMLNPEQKKAVDTIEGPVLVIAGPGTGKTQLLSTRIANILQKTDTSPE
NILAMTFTEAGARNMRERLSQFIGTDSYKIGIFTYHGFANEIINNYREYFLDKDLDSLAD
DLNIFKILESLKNNLDDSSRLKKDNISSLTTAISHAKQALITPEMLAKIAKQNVELDKKL
LKKLDEEEIDFSVLEEKGISKKTVFPEFYENLLIALAEVLKDVTPAHPKVKPNLFYTFEA
LEKLLEENKNAEKFSTKPFTSFRNDFFGIKNEKGRLPKDFYTNLKIQEFADFYKKYEEAL
HNKGMFDYNDMILETIKTIEQKTELKLSLQEKYQFILLDEYQDTNAAQSRLVELLTDNEI
FNGRPNILAVGDDDQAIMAFQGAKSSNMLDFYHRYKDTKVINLRINYRSRSEILYSAKNI
AEQIESRLNENLPTRIDKNIEAFDDSKFESPYLVRKDFLSQISEFGWIADEISNLIKSGV
SPKEIAVLAPKHNPLQMLAPYLKRQEIAVSYEKKENIFEDEIISSLIKISQLIIAISDND
LDKVNALFPEILSFNFWKLNPVEIWKLSWKINSKRETVNSWLPESLFCEDKNISQIVEFI
ISLSQKIDSYSLESILDILLGSVKWNFKKGEIVENSSQHDASEIFESPIRKLFSQDSDES
YYDTLSNLIVLRENLREFTREHSNSLRDLAAFAKDYENAGMRIINTNPHKATDDAVQLMT
AFQAKGLEFSHVFMIDTNNRVWNGKSNNFQSVRFPKNLEFIPISDEGKDTKLRLLFVAIT
RAKTHLYMTNHLMSFSGEKNTRLEFFDEHEKETEDEKFFVASFLPEKFQKIELEENDAKE
LDIQTSWHDFYRPKNDSMRDLLKNRLENYAISATHLNNFIDVEYGGPINFFENIILRFPQ
GYSINSIAGNLAHNAFRKAQNELNQNGFFDSQNIIRGLEKDISKYVLTNEDRTKILKTAA
ESVEKIFSTKSELFQKGNRAEENFHSKGIMLGDAHLTGTVDLLIIDKNNKEITILDWKTG
SIPLDSKDRSKIVVNSKIYKYEQQLFFYKFMVENSKEFSGYKVKSGILQFVQPNADGDIA
SHSIDFETPANKLRADFTNLLIQAVFEKIKKFDFDDDISKFSEESLKGIKKFENQLVKEF
AISHNLKEVPLYKKVKRGSSHIFTLTKAILEDF
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattttcagaaaattttcgaaaaaaagtataagatgttaaatcccgagcaaaaa
aaggctgtagacacaattgaggggccagttttggttattgcggggccaggaacgggaaag
actcaattgctttcaacccgcattgcaaacattttgcaaaaaaccgacacttcgccggaa
aatattctagcgatgacttttacggaagctggtgcccgaaatatgcgcgagcgtctttcg
caatttattggaactgattcgtataaaattggaattttcacatatcacggttttgcaaat
gaaattatcaataattatcgtgaatattttctagataaagacctcgatagcctagccgat
gatttaaatatttttaagattttagagagtttaaaaaacaatctcgatgatagctctcgc
ctaaaaaaagataatatcagtagcctaacaacggcaatttcacatgcaaaacaggcgtta
attacccctgaaatgctagcaaaaattgcaaaacaaaatgttgaattggataaaaaacta
ctcaaaaaactagacgaagaagaaatcgatttttctgtgcttgaagaaaaaggcatttct
aaaaaaactgtttttcctgaattttatgaaaatctccttatcgcgctagccgaagttcta
aaagatgtaacgccagctcatccaaaagttaagccaaatcttttttacactttcgaagcg
cttgaaaaacttcttgaagaaaataaaaatgccgaaaaattctcaacaaaacctttcact
agttttcgaaatgattttttcggaataaaaaacgaaaaaggacgtttaccaaaagatttt
tatacgaacttaaaaatccaagaatttgccgatttttacaaaaaatatgaggaagcccta
cataataagggtatgtttgattataatgatatgatcctcgaaacaattaaaactatcgag
caaaaaacagaattaaaattgtcgcttcaagaaaaatatcaatttattcttttggatgaa
tatcaagatactaacgccgcgcaaagcagacttgttgaacttctcacggacaatgagatt
tttaatggtcggccaaatattttagctgttggtgatgacgaccaggcaattatggccttt
cagggcgctaaaagctcaaacatgctcgatttctatcatcgttataaagatacaaaagtt
attaatttaagaataaactaccgttcgagaagtgaaattttatattctgctaaaaatatt
gcagaacaaatcgaaagcagactaaatgaaaacttaccaacacgaattgataaaaatatt
gaagcttttgatgattctaaattcgaaagtccctatcttgttcgaaaagattttttgagt
caaatttcagaattcggctggattgcggatgaaatttcaaacttaataaaatccggagtt
agtccgaaagaaatcgccgtgcttgcgccaaaacacaaccctttacaaatgcttgcgcca
tatttaaaacgccaagaaatagccgtttcctacgagaaaaaagagaatatttttgaagac
gagattattagttcgctaattaaaatttcacaacttattattgcaatttcagacaatgac
ttagataaagtaaatgcgctttttcctgaaattctaagctttaatttctggaaactaaat
cctgttgaaatctggaaattaagttggaaaattaactctaagcgagaaactgtaaattct
tggctcccagaaagcctgttttgtgaagataaaaatatttcgcaaattgtagagtttatt
atttcattatctcaaaaaattgacagttatagccttgagtctatccttgatatactgctc
ggtagcgtaaaatggaacttcaaaaaaggagaaattgtagagaattctagccaacatgat
gctagcgaaattttcgaaagcccaattcgaaaactatttagccaagattctgatgaaagt
tattatgatactttatctaatttgattgttttgcgcgaaaatttgcgagaattcacacga
gagcattcaaattcattgcgagaccttgcggcatttgctaaagattatgaaaacgcagga
atgcggataattaatacaaaccctcacaaagcaactgacgatgcagttcaattaatgaca
gcctttcaggcgaaaggtttggagttttcgcacgttttcatgattgataccaataatcga
gtttggaacggaaaaagcaataattttcaaagcgttcgttttccaaaaaatcttgaattt
ataccaatctcggatgaaggaaaagataccaaattgcgtttgttgtttgtagcaattacg
cgcgcaaaaacacatctctatatgacaaatcatttgatgagcttttctggcgagaaaaat
actcggctagaattctttgacgagcacgaaaaagaaacggaagacgaaaaattctttgtt
gctagctttttgcctgaaaaattccaaaaaattgagcttgaagaaaacgacgctaaagaa
ttagacattcaaaccagctggcatgatttttatagaccaaaaaatgattcaatgcgagac
ttattaaagaatcgtcttgaaaattacgcaattagcgccacgcacttgaataattttata
gatgtcgaatacggcggacctattaactttttcgagaatataattttgcgctttccgcaa
ggatactccataaatagcattgctggaaacttagcccataacgcttttcgaaaagcccaa
aatgagctaaatcaaaacggatttttcgatagtcaaaacattattagaggtctcgaaaag
gatatttcgaaatacgttttaacaaatgaagacagaacaaaaatcttaaaaaccgcagct
gaatctgtcgaaaaaatattctcaacaaaaagcgaactattccaaaagggaaaccgtgca
gaagaaaatttccactcaaagggaattatgcttggagatgcacacttaactggaactgtt
gatttgctaattatcgataaaaacaataaagagattacaattttagactggaaaacaggt
tcgatacctttggattcaaaagatagaagtaaaattgttgtaaattcaaaaatttacaaa
tacgaacagcaactatttttctataaatttatggtcgaaaactcgaaagaattctctggc
tataaagttaaatctggaatattacaatttgttcagccaaatgcagatggtgatattgca
agccattccattgatttcgaaactcccgcaaacaaattgcgcgcagattttactaatttg
ttgattcaagctgttttcgaaaaaattaaaaaattcgattttgacgatgatatttcaaaa
ttctctgaagagagcctaaaaggaattaagaagttcgaaaaccagctagttaaagagttt
gcgatatctcataacctgaaagaagtgccactctataaaaaggtaaaaagaggatcatcc
catatcttcaccctaaccaaggctattttagaagatttctag
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