Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_002805
Help
Entry
HXK95_002805 CDS
T09858
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
Pathway
nbj03030
DNA replication
nbj03410
Base excision repair
nbj03420
Nucleotide excision repair
nbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HXK95_002805 (polA)
03410 Base excision repair
HXK95_002805 (polA)
03420 Nucleotide excision repair
HXK95_002805 (polA)
03440 Homologous recombination
HXK95_002805 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbj03032
]
HXK95_002805 (polA)
03400 DNA repair and recombination proteins [BR:
nbj03400
]
HXK95_002805 (polA)
Enzymes [BR:
nbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HXK95_002805 (polA)
DNA replication proteins [BR:
nbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HXK95_002805 (polA)
DNA repair and recombination proteins [BR:
nbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HXK95_002805 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HXK95_002805 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
MotA_activ
HHH
Motif
Other DBs
NCBI-ProteinID:
QWB91482
UniProt:
A0A9E6SVS4
LinkDB
All DBs
Position
complement(565456..568035)
Genome browser
AA seq
859 aa
AA seq
DB search
MKKLVIIDGKSVFYRGYYAMKNLSLEDGTPTGGVFGFASLAFEVIRKLKPDYVVVAWDKK
GTSTAKRSAIYPEYKAGRKKAPDDFYEQIPLLKDFLKTLGWPLFETDGYEADDILGTLAL
QANKLGVEANLITSDLDMLQLIDQNTKVFAMKRGFSEIEEFDLEYFEEKYGLKQSQFLDL
KALQGDSSDNIPGVPGIGPKTATQLLQEFFTLEGIYENLDKIKPSWRKKLEDGKESAFMS
KEIAKIFLDAPVEIDFDAADIHNFNYEEVLKELRKLEFNSLVKKIPKEMRASSVNFENSN
QINIFSEPERETKNLDFLPEIKAETFFKKNQKMVFFDLDQDSKQIFASDFENISQFKVED
FLKFQEFFENTKTAFFNAKETFHGLAKNNIDFCEWQEIYDIEQMEFLLNALIRDKTLSGI
FGEKINEDEPKNRISAMRIIFEEQQKKLEKVPKIREIAEKLDFPMSRVLFKMEQAGVEIC
PNIFAKMSENFAGEIAKLESEIFQIAGREFNVASPLQLSKILFEDLALPTKGIKKSKNGF
STGQKELDKLREFSPIIEKIEHFREFSKLKNTYVDALPKLADKNNRIHSTFAQDITTTGR
LSSSNPNLQNIPIRSDLGRKIREGFVAKEGNLLVSADYSQFELRLAAVLSGDKNLIETFG
KDLDIHAKTASEVFGVPIEDVSKDQRRVAKIINFSVLYGVGAHNLSGTIGVGFYEAKKYI
EEYFNAHKPIQDFMDKTLEKAKNEGYVETFFGRRRPTPDINSSNYMIREMAKRAAQNMPI
QGTEADLMKRAMLVVDEKITQTGLGEQILQIHDSILIETPEENADKVAEILKNVMEDVAP
ELPVKLKVEVSVGKNWLKL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactagtgattattgatggaaaaagcgtattttataggggttattacgcaatg
aaaaatttaagccttgaagatggaacgccaaccggcggagtttttggctttgcgagtttg
gcctttgaggtaattcggaagctaaaaccagattatgtggtggtagcttgggataaaaaa
ggaacttcaaccgctaagaggagcgcgatttaccccgaatataaagctggtcgtaaaaag
gcgccagatgatttttatgagcaaattccacttttgaaggattttttgaaaactttgggt
tggccgctttttgagactgatggttatgaggcggatgatattttaggaacgctggcgctt
caagctaataaacttggtgttgaggctaatttgattacatctgatcttgatatgctgcag
ttgattgatcaaaatacaaaagtttttgcaatgaagcgaggtttttcagagattgaagag
tttgatcttgaatattttgaggaaaaatacggcttaaaacaatctcagtttttagattta
aaggcgcttcagggtgattcgagcgataatattccgggtgttccggggattggaccaaaa
acagcaacgcaacttttgcaggaattctttactcttgaggggatttatgaaaacttagat
aagattaaaccatcttggcgaaagaagcttgaggatggcaaagaatcagcatttatgagc
aaagagattgctaaaatttttttggatgcgccagttgaaattgattttgatgctgccgat
attcataactttaactatgaagaagtattgaaggagcttcgaaaattagaatttaactct
ttagttaaaaaaattcctaaagagatgagggcaagttcagtaaattttgaaaatagtaat
cagataaatatttttagtgaacctgagcgtgaaacaaaaaatcttgattttttgccagaa
attaaagctgaaactttctttaaaaagaatcaaaaaatggttttctttgatcttgaccag
gattcgaaacagatttttgcctcagattttgagaacatttctcagtttaaagttgaagat
tttttgaaatttcaggaatttttcgaaaatacgaagacagcattttttaacgccaaagaa
acttttcacggtttagcaaaaaataatatagatttttgtgagtggcaagagatttatgat
attgaacagatggagtttttgctaaatgcgttaattcgcgacaagaccttgagtggtatt
tttggtgaaaaaataaatgaagatgagccaaaaaatagaatttcggcgatgcgaattatt
tttgaagaacagcaaaaaaagcttgaaaaagtgccaaaaattcgcgaaattgctgaaaaa
ttagacttcccaatgagtagagttttattcaagatggagcaggctggtgttgaaatctgt
ccaaatatttttgcaaaaatgagtgaaaattttgccggagaaattgctaaattagaatct
gaaatttttcaaattgcaggcagggagttcaatgtggcgagtccacttcaactttcgaaa
attctgtttgaagatttagctttaccaacaaaaggtattaaaaaatcaaaaaacggtttt
tcaactggccaaaaagaattagataaattgcgcgaatttagcccgatcattgaaaaaatt
gagcattttagagaattttcgaaattaaaaaacacctatgtcgacgctttaccaaaactt
gctgataaaaataaccgaattcatagcacttttgcgcaagatattacaacaacaggtcgg
ctttcttcaagtaatccaaatttacaaaatattccaatcagatcagatcttggtcgaaag
attcgtgaaggttttgtggctaaagaaggcaatcttctagtttcggcggattattcgcag
ttcgaattgcgtcttgcagctgttttatcgggagataagaatcttattgaaacttttgga
aaagatttggatattcacgcaaaaacggctagcgaagtttttggcgttccaatagaagat
gtttcgaaagatcagcggcgtgttgcgaaaatcattaattttagcgttctttatggtgtt
ggtgcacacaatctttcaggtacaattggtgttggtttttatgaggcaaaaaaatatatt
gaagaatattttaatgcgcataagccgattcaggattttatggataaaactttagagaaa
gctaaaaatgaaggctatgttgaaacattctttggtcgaaggcgacctacgccagatata
aattcaagtaattacatgattcgtgaaatggccaaacgagctgcacaaaatatgccaatt
cagggaactgaagctgacttgatgaagcgggcaatgcttgttgttgatgaaaaaattacg
caaactggtttgggtgaacaaattttacagattcatgattcaattttaatagaaacgcca
gaagagaatgcagataaagttgctgaaattctaaaaaatgtgatggaggatgttgctcca
gaattgccggttaaactaaaagttgaggtctctgtaggaaaaaattggttgaagctatga
DBGET
integrated database retrieval system
