Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11: HXK95_002960
Help
Entry
HXK95_002960 CDS
T09858
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nbj
Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11
Pathway
nbj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nbj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HXK95_002960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nbj02000
]
HXK95_002960
Transporters [BR:
nbj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HXK95_002960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6618
Motif
Other DBs
NCBI-ProteinID:
QWB91509
UniProt:
A0A9E6MSW2
LinkDB
All DBs
Position
complement(596978..598825)
Genome browser
AA seq
615 aa
AA seq
DB search
MDFKKNPKKVKRVSNMSQKNRGKVSKVRSIQAIDSKKLSFLEKADIAEKAVISHTKKLFF
GRFENLSNVRKLIVVWICVMALLISSIGLFRWLSDRNFSEEVFFRGGTYSEGFLSEIKTL
NPIFATTDAEKSFERLAFSRLYSIDSDGSLKGDLAESVETSDNYRNFTIKMRKNATWSDG
QKITADDVIFTIKKLKDQNLNPSAYKVWKNVEASKSGDYEVKFKVPSNSSSVLYGFNFSI
LPEHVLKDVSTDKIRESSFSNNPVTSGPFNFKGVQTNSNTNKTTVSLVKNKNYYKGEPYI
DNFDIVAFQDEAKLKKALVSGEIVASPNVKINDFSSSEQVGLKSYETSVNRGIYAFLNNS
DPILKDAKVRKAIQTGLDMNKIHSKMEYINNLDYPTLNKFINTNWLSVPEYNFSQAEKML
DETGWMKNSKGIREKDGQKATINIATTSVYNYKKSAEEIASQLKKLGFDVNSTIIDKDDK
LGTFVQTILQPRNYGILIYEIDMGADSDIYPFWHSSQASQKGLNFSNYSDAISDDLLLNA
RTARTFDDKKTQLTKFTRRWINSSAAIGLGQTKVSYVFRKSVQPYSAENKFVTDTDRYSD
VIYWSAKKETLYKTP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaaaaaacccaaaaaaagttaagcgagtttctaatatgtctcaaaaaaat
agaggcaaagtttcgaaagttcgttcaattcaggctatagatagtaaaaaactgtctttt
ttagagaaggctgatattgctgagaaagctgttatttcgcataccaagaagctattcttt
ggacgcttcgaaaacctctcaaacgttcgaaaactaattgttgtttggatttgtgtgatg
gctctattgatttcgtcaattggtttatttagatggttgagtgatcgtaatttttctgaa
gaggttttttttaggggtgggacgtattcggaagggtttttgagtgaaattaaaacttta
aatccaatttttgctacaactgatgcagaaaaatctttcgagcggcttgctttttctaga
ttgtatagtatagatagtgatggctcgctgaaaggagatttggcggaaagtgttgaaact
agtgataattatcgcaatttcactataaaaatgcgtaaaaatgctacttggtctgatgga
caaaaaattactgcagacgatgttatttttactataaaaaaattaaaagaccaaaattta
aacccatctgcatataaagtttggaaaaatgtagaggcttcaaaatcaggtgattatgag
gttaaatttaaagttccttcaaattcatcatcagttttatatggtttcaatttttcaatt
cttcctgaacatgttttaaaagatgtttctacagataaaattcgtgagagttcgttctct
aataatccagtaacttcaggcccctttaattttaaaggagtgcaaactaatagcaatact
aataaaactacagtttcattagtaaaaaataaaaattactataagggtgaaccatatatt
gataattttgatattgttgcttttcaagatgaagccaaactaaagaaagcgctagtttct
ggtgaaattgtagcttcacctaatgttaaaattaacgattttagtagttctgaacaagta
gggttgaagtcatatgaaactagtgttaatcgtggaatttatgcttttttgaataactca
gatccaattttaaaggatgcaaaggttcgaaaagcgatccagactggtttagatatgaat
aaaattcatagtaagatggaatatatcaataatttggattacccgacattaaataagttt
ataaataccaattggctttccgttcctgaatataatttttcacaagctgagaaaatgttg
gatgaaactggctggatgaaaaattcaaaaggtattcgtgaaaaagatggtcaaaaggca
actattaatattgcgacgacgagtgtttataattataaaaaatctgcagaagaaatcgcg
tctcagttgaaaaagcttggttttgatgtgaatagtacgattattgataaagacgataag
cttggcacttttgttcaaacgattcttcaaccaagaaattatggaattttaatttatgag
attgacatgggtgcagactccgatatttatcctttttggcattcttcgcaagctagtcaa
aagggcttaaatttttcaaactatagtgacgctatctcggatgatttattgttgaatgct
cgtactgcacgaactttcgatgacaagaagacacagctaacaaagtttactcgacgctgg
attaacagttctgctgcaattggcctcggtcaaacaaaagttagttatgtatttagaaag
tcagttcagccttattcagctgaaaataaatttgtaacagatactgatagatattcggat
gtaatctattggtctgctaaaaaggaaactctttacaagactccttaa
DBGET
integrated database retrieval system
