Neisseria brasiliensis: GJV52_00265
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Entry
GJV52_00265 CDS
T06557
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nbl
Neisseria brasiliensis
Pathway
nbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJV52_00265 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbl03400
]
GJV52_00265 (recD)
Enzymes [BR:
nbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GJV52_00265 (recD)
DNA repair and recombination proteins [BR:
nbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJV52_00265 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
T2SSE
AAA_16
AAA_28
nSTAND3
SRP54
UvrD_C
NTPase_1
AAA
AAA_24
TrwB_AAD_bind
AAA_5
ATPase
Motif
Other DBs
NCBI-ProteinID:
QGL24117
LinkDB
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Position
complement(44737..46476)
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AA seq
579 aa
AA seq
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MNAPIDLNQAAALAATQFLQHYAPEDAVVVTPYVEALFSALQSGHSFIWVSDKEAAALKR
AVLVVGTDGETPLVLNGRRLFLGRLWQLEHDLAVEIKRLAMASVDDVDWLQASQNLQNWF
AEIGSEGQRDAAGLALLQAFMLITGGPGTGKTTTVAKLLGLICDNATSLPRIALAAPTGK
AAAHMARALHRALDRFDLPERIKQHLLLLEGQTVHRLLKLRPPQMQSAFHAEQPLPLDVL
VVDEASMLDLSLLLQLLKAIPSGCRVIFLGDEFQLPSVGVGAVLAALSRETVLDEDTHRR
LSEYLPQHTFKVAEHPPALSQNIAHLQVSHRFGTDSGIGCLARAVVSGDSETAWAQFERF
PDELQVLHADMKHQAEYLYHKHEKYWQAVESGNVALAFGHAADVVVLTAWRQDAENFNQA
YFRHLQAKQRISGDMPWFAGQMIMITRNDYALDVFNGDIGLIMPDGESANGLAAYFPFAD
SFRKIPISRLPAFETAFAMTVHKSQGSEYREVWLLPPSIDMANESDDVLNSLNNALLYTG
ITRAQKRFVFWGNKKIFEWAVKTQKKRQTALDEIINALF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcccatcgatttgaaccaagcagcggccttggctgcaacccagtttttgcaa
cactacgcgcccgaagatgcggtggtggtgaccccttatgttgaagccttgtttagcgcg
ctgcaaagcgggcattcgtttatctgggtcagcgataaagaagcggcagccttgaaacgt
gctgttttggtggtgggcaccgatggtgaaacgccgctggtgctgaacgggcggcgtttg
tttttgggcaggctttggcagttggaacacgatttagcggttgaaatcaagcggctggcc
atggcctctgttgatgatgttgattggctgcaggcttcgcaaaatctgcaaaactggttt
gccgaaataggcagcgaaggacagcgcgatgccgccggtttggctttgctgcaagcgttt
atgctgattacaggcgggccgggcaccggtaaaacgaccacggttgccaaattattgggt
ttgatttgcgataatgccaccagcttaccgcgcattgccttggctgcaccgacaggcaaa
gcagccgcgcatatggcacgcgcgctgcatcgtgctttagatcgctttgatttgcctgaa
cgtattaagcaacacttgttgcttttagaaggccaaaccgtgcatcgcctattgaagctg
cgcccaccgcaaatgcaatcggcctttcatgcagaacagcctttgcctttggatgtgttg
gtggtggatgaagcatcgatgctcgatttatcgctgttgttgcaattgctcaaagccatt
ccgagcggttgccgcgtaatctttttgggggatgaatttcaattgccgtcggttggtgtg
ggcgcagtattggccgccttatcgcgcgaaaccgttttggatgaagacactcatcgccgt
ttaagcgaatatttgccgcagcatacatttaaagttgccgaacatccgccggctttatcg
caaaacatcgcccatttgcaggttagccaccgttttggtacggatagcggcatcggttgc
ttggcgcgggcagtggtttcaggtgacagtgaaacagcgtgggcgcagtttgaacgcttt
cccgatgaattgcaggtattgcatgccgacatgaagcatcaagccgaatacttgtatcac
aagcatgaaaaatactggcaggcagttgaaagcggcaatgtggcactggcatttggccat
gcagcggatgtggtggtgttaacggcttggcgacaagatgcggaaaactttaatcaggct
tatttccgccatttacaggctaaacagcgtatatcgggcgatatgccatggtttgccgga
caaatgataatgatcacgcgcaatgattatgcgttagatgtgttcaatggcgacatcggc
ttgattatgccggatggcgaatcagctaatggcttggcggcgtattttccgtttgcagac
agtttcagaaaaatcccaatcagtcggctgccggcttttgaaacagcatttgccatgacc
gtgcataaaagccaaggttcagaatatcgggaagtgtggttgctgccgccgagtattgat
atggccaatgaaagtgatgacgtgttaaacagcttaaataatgcgctgttgtacacaggt
atcactcgtgcgcagaagcgttttgtgttttggggcaacaaaaaaatctttgaatgggca
gtaaaaacccagaaaaagcgtcaaacagccttagatgaaataattaatgccttgttttaa
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