Neisseria brasiliensis: GJV52_08910
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Entry
GJV52_08910 CDS
T06557
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
nbl
Neisseria brasiliensis
Pathway
nbl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nbl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GJV52_08910 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbl03021
]
GJV52_08910 (rpoD)
Transcription machinery [BR:
nbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJV52_08910 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
Cwf_Cwc_15
DUF5660
Catalase-rel
SIP1
DUF713
TMPIT
Motif
Other DBs
NCBI-ProteinID:
QGL26475
LinkDB
All DBs
Position
complement(1777677..1779635)
Genome browser
AA seq
652 aa
AA seq
DB search
MSMSKNHEEYQDQDDNRPLTVEEQRTRLRQLIIMGKERGYITYAEINDALPDDMSDADQI
DNIVNMITGLGIQVTEQAPDAEDILLSDNAATITDDDAVEEAEAALSSADSEFGRTTDPV
RMYMREMGQVDLLTREDEIIIAKKIENAFKNMVQAISACPGSVAEILALIDQIRNEEIRV
DEVVEAIIDPNEVLLNELGLGHLESNASDDTTNNDDDEDSDDDEEDDSDDDSAADAESMT
AANLEELKQKVLEHFAQIEADYAEMTAQLAKHHSQHPAYLTHRDAIANKLLEVRFSTRQI
ENLSNNLRGRVDQIRKLEREIRDICLDRVHMDREYFINNFLPNITDLNWVEEEVAKGRVW
SDALDRFRHAIIEKQTALSDMQKETQISIEELKEINKNMVASERETAAAKQEIIQANLRL
VISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQ
ARTIRIPVHMIETINKMNRISRQYLQETGEEPDSAKLAELMEMPEDKIRKIMKIAKEPIS
METPIGDDDDSHLGDFIEDANNVAPADAAMYSSLHEVTKEVLESLTPREAKVLRMRFGID
MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLKSFLDSEDNKQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atatctatgtctaaaaatcacgaagaataccaagatcaagatgataaccgtccgttaacc
gtagaagagcaacgtactcgtctgcgacagctcatcatcatgggtaaagagcgcggctac
attacctatgcggaaatcaacgatgccctgccggacgatatgtctgatgccgaccaaatc
gacaacatcgtcaacatgattaccggcttgggcatccaagttaccgaacaagcacctgat
gccgaagacattctgctcagcgacaatgccgctaccattaccgatgatgatgccgttgaa
gaagccgaagcggcactctccagcgcagattccgagttcggtcgcaccaccgaccctgtg
cgtatgtacatgcgtgaaatggggcaggttgacctgctgacacgcgaagacgaaatcatc
atcgccaaaaaaatcgaaaatgcgtttaaaaacatggttcaagccatttctgcctgcccg
ggttcggtcgcagaaatcttggccttgattgaccaaatccgcaacgaagaaatccgcgtc
gatgaagtagttgaagccattatcgacccgaatgaagtcttgctgaacgaattgggcttg
ggtcatttggaaagcaatgcttctgacgacaccacaaacaacgatgatgatgaagacagc
gatgacgatgaagaagacgacagcgacgatgatagcgcagccgatgccgaaagcatgacc
gctgccaatttggaagagctgaaacaaaaagtcttggagcatttcgcccaaatcgaagcc
gattacgccgaaatgaccgcgcaattggccaagcatcacagccagcatccggcttattta
acccatcgcgatgccatcgccaacaaattgttggaagtgcgcttctcgacccgtcaaatc
gaaaacctgagcaacaacctgcgtggccgtgttgaccaaatccgtaagctcgagcgcgaa
atccgcgacatctgcttagaccgcgtacacatggatcgcgaatacttcatcaacaacttc
ctgccgaatatcaccgacttgaattgggtagaagaagaagtcgccaaaggccgcgtatgg
agcgatgcactcgaccgcttccgccatgccatcatcgagaaacaaactgcgctttccgat
atgcagaaagaaacgcaaatctcgattgaagaattgaaagaaatcaataaaaacatggtt
gccagcgagcgcgaaaccgctgcagccaagcaggaaataattcaggccaacttgcgtttg
gtgatttcgattgccaagaaatacaccaaccgtggcttgcaattccttgatttgattcaa
gaaggcaacatcggcctgatgaaagccgtggataaattcgaataccgtcgcggctacaaa
ttctcgacctacgccacttggtggattcgtcaggcgattacccgctcgattgccgaccaa
gcgcgcaccatccgcattccggtgcacatgattgaaaccatcaacaagatgaaccgcatt
tcgcgccaatatctgcaagaaaccggtgaagaaccggattcagccaaattggccgagctg
atggaaatgccggaagacaaaatccgcaaaattatgaaaatcgccaaagagccgatttcg
atggaaaccccaatcggcgacgatgatgattcacacttgggcgatttcatcgaagatgcc
aacaacgtggcaccagccgatgcggccatgtattccagcctgcacgaagtgaccaaagaa
gtgctggaaagcctgaccccacgtgaagccaaagtgttgcgtatgcgcttcggtatcgac
atgaacaccgaccacacgctggaagaagtaggcaaacaatttgacgtcacgcgcgagcgt
atccgccaaatcgaagccaaagccctgcgcaaactgcgtcacccaacccgcagcgaccgc
ttgaagagcttcttagacagcgaagacaacaagcaataa
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