Neisseria brasiliensis: GJV52_09005
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Entry
GJV52_09005 CDS
T06557
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nbl
Neisseria brasiliensis
Pathway
nbl03030
DNA replication
nbl03430
Mismatch repair
nbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJV52_09005
03430 Mismatch repair
GJV52_09005
03440 Homologous recombination
GJV52_09005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbl03032
]
GJV52_09005
03400 DNA repair and recombination proteins [BR:
nbl03400
]
GJV52_09005
Enzymes [BR:
nbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJV52_09005
DNA replication proteins [BR:
nbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJV52_09005
DNA repair and recombination proteins [BR:
nbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJV52_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QGL25667
LinkDB
All DBs
Position
complement(1803426..1804817)
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AA seq
463 aa
AA seq
DB search
MAHASRWPRLAAAFSRIGLPVAVVDLETTGGNLYQDRVTEVAVLRFENGQAKRYEWLVNP
QQPISDFIARLTGIDDELVKDAPFFGQIAADLLPLLRGTLLLAHNSRFDYTFLRHEFQRI
GIDFAAPALCTVQLSRRLYPQFHKHNLDSIIERMGISVENRHRAMTDVLALVDFLEKSLE
EKGEEEWLNHSRVLLNPKMLPTWLPNILAEQLYALPDSEGVLVWLDKYGQAQAVQSHTRA
YFEVAAMLNGKKIPSFAQSAASIRFMPAIGPMHALWLKAQAMVQFNLRPSETVRTFTTVQ
FSPDEHGVLQARLVPMSNGIHPHRPYGFFLHRKGAKRALAAWAQEYGLCPDSLNILPETN
AKNEPCPIQAIGQCDGSCQDANGVQQQNRRILSLAPLLPVADWGRAHEIDIRETDELSGE
TLAFRCTANAVALPDGRWYFDDTLPAIIKAKFKQGKTAIEILN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgcttcgcgttggccgcggttggctgctgctttttcccgcatagggttgccg
gtggcggtggtggatttggaaacgaccggcggcaatctctatcaagaccgtgtcacggaa
gtagcggtattgcgctttgaaaacggccaagccaagcgttatgaatggctggtcaatccg
cagcagccaatttcggattttattgcccgcttaaccggtattgacgatgagttggtcaaa
gatgcgccgttttttggccaaattgctgccgatttgctgccacttctgcgtggtacgctg
ctgctggcgcacaacagccgctttgattacacgtttttgcgacatgaatttcaacgcata
ggcattgattttgccgcaccggctttgtgtacggtgcaattgtcgcgccgtctgtatccg
caatttcacaaacacaatctcgacagcatcattgaacgcatgggtatttcggtggaaaac
cgtcaccgcgccatgaccgatgttctggctttggtggattttttggaaaaaagcctggaa
gaaaaaggcgaagaagaatggctcaaccacagccgcgtattgctgaatccgaaaatgctg
ccgacttggctgccgaacatattggccgaacagctctacgccctgcccgacagcgaaggt
gtgctggtgtggctggataaatacggtcaagcgcaggcggtgcaatcgcatacacgcgct
tattttgaagtagcggccatgttaaacggcaaaaaaattccgagctttgcacaaagcgcc
gcttctatccgctttatgccggccatcggacctatgcatgctttgtggttgaaagcgcaa
gccatggtgcaatttaatctcaggccgtctgaaaccgtgcgcacatttaccacggtgcaa
ttttcaccggatgaacacggcgtgttgcaagcgcgattggtgccaatgagcaacggcatt
cacccccaccgcccttatggttttttcctgcacagaaaaggtgccaaacgcgctctagca
gcatgggcgcaggaatacggcctctgccccgattccctgaatatcctgccggaaaccaac
gccaaaaatgaaccttgcccgattcaagccatcggccaatgtgatggctcgtgccaagat
gcaaacggtgtgcaacagcaaaaccgccgcatcctctcgctcgctcccttgctaccagtc
gccgattggggcagagcgcacgaaatcgatattcgcgaaacagacgaattatccggcgaa
acactggcgttccgctgcaccgccaatgccgtcgccctgcccgatggccgctggtatttc
gatgacacgctgcccgctattattaaagcgaaattcaagcaaggcaaaaccgccattgaa
attctgaattaa
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