Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_01180
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Entry
HYY55_01180 CDS
T09897
Name
(GenBank) tRNA-specific 2-thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
nbn
Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HYY55_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbn03016
]
HYY55_01180
Enzymes [BR:
nbn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HYY55_01180
Transfer RNA biogenesis [BR:
nbn03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HYY55_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
DUF7411
ThiI
Arginosuc_synth
Asn_synthase
QueC
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
QQG46442
UniProt:
A0A7T5RLR5
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All DBs
Position
complement(231234..232403)
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AA seq
389 aa
AA seq
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MKRPKVFVAMSGGVDSSVAAALLKKSGKFEVVGCHMKCWSAWDQCSVEKDAEDARAVAEK
LEIPFYIFDFEKEYRERVFNYMVREYAVGRTPNPDVFCNSEIKFGIFLEKALALGADFVA
TGHYVRKSEIRNQKSEIISNPQILNKRNVLNLENSNLEFVSSFDISASNFSLHAARDSAK
DQSYFLWRLTQNQFKHALFPIGDYLKSEIREMARKFGLPTADKKDSQGLCFVGKVDFSDF
LREILPKNPGPIATTSGKIIGEHDGLNFYTLGQRHGIKIGGTSEPLYVAAKEAATNTLIV
AEGDLDPALYEKEIEITDINWIGGIKPELPLNCESRIRYRQPLQKCGLRKSTDGGKVRVV
FNEPQKAATPGQSAVFYKCGEMLGGGIIK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggccaaaagtattcgtagcgatgtcgggaggagttgattcttcggtcgcagcc
gctttgcttaaaaaaagcggaaagtttgaagtggttggatgccatatgaagtgctggtcg
gcgtgggaccagtgcagtgttgagaaagacgctgaagatgcgagggcggttgccgaaaaa
ctggaaataccattttatatttttgattttgagaaagaatatcgcgagcgcgtctttaat
tacatggtgcgtgagtatgctgttggcagaacgccaaacccggatgtattttgcaactcg
gaaataaaattcggtatttttttggaaaaagctctggcgcttggcgcggactttgtggcg
acggggcactacgtccgaaaatcagaaatcagaaatcagaaatccgaaataatatctaac
ccccaaatcctaaataaaagaaatgttttgaatttggaaaattcgaatttggaatttgtt
tcgagtttcgatattagtgcttcgaatttttctttgcacgctgcgcgcgatagcgcgaaa
gaccaaagttatttcttgtggcgtcttacgcaaaatcagttcaaacacgccttatttccg
ataggggattatctaaaaagcgaaatcagagaaatggcgaggaaattcggactgccgaca
gccgataaaaaggattcccaaggtctttgttttgtggggaaggttgattttagcgatttt
ttacgcgaaattttaccaaaaaatccggggccgattgcgactacctccggaaaaataata
ggcgagcacgacggccttaatttttacactttggggcaaaggcacggaattaaaatcggc
ggcacctccgagccgctttatgttgccgcgaaagaagccgcaactaacaccctcattgtc
gctgaaggagatttagaccccgcgctttacgaaaaagaaattgaaatcactgatataaat
tggattggaggaattaaaccagagcttccgttaaattgcgaatcgcgcatccgttaccgc
cagccccttcaaaaatgtggacttcggaagtccacggacggggggaaggtaagggttgtt
tttaatgagccacaaaaagccgcaacccctggccaatcggctgttttttataaatgtgga
gaaatgctcggcggcggaataataaaataa
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