Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_02920
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Entry
HYY55_02920 CDS
T09897
Name
(GenBank) hypothetical protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nbn
Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Pathway
nbn03030
DNA replication
nbn03410
Base excision repair
nbn03420
Nucleotide excision repair
nbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYY55_02920
03410 Base excision repair
HYY55_02920
03420 Nucleotide excision repair
HYY55_02920
03440 Homologous recombination
HYY55_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbn03032
]
HYY55_02920
03400 DNA repair and recombination proteins [BR:
nbn03400
]
HYY55_02920
Enzymes [BR:
nbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYY55_02920
DNA replication proteins [BR:
nbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HYY55_02920
DNA repair and recombination proteins [BR:
nbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HYY55_02920
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYY55_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QQG45908
UniProt:
A0A7T5RKN7
LinkDB
All DBs
Position
complement(532511..534862)
Genome browser
AA seq
783 aa
AA seq
DB search
MAKKQTKKLLVILDAHAILHRAYHALPPFTSPKGEPTGALYGFTTMLLKIIRELKPDYIA
AAYDMAEPTFRHLAFEKYKATRAKVDDELIPQFNRSREILKSFNIPVYEEAGYEADDIIG
TVSEKNKKSKDLNIVIASGDLDTLQLVSGDKVRVYTLKKGKEEFIYNQKEVEKRYGFGPE
FVPDYKGLVGDPSDNIPGVKGIGEKTAKDLIQKFGSLENILDLAKNKPEKLKSAGIKDRI
IKLLAENEEEALFSKTLATIRKDAKIKFDLDKARWSGFKPKEIENLFRELGFASLIQRIS
QATGGKEEETERGKINAELASKIELAFWLLDSRRLNVSAEEVVKSMGVKDASEAYVSLKL
EMEKAGLLKIFQDIELPLIGVLWEMRETGIALDIKILKELSKKYDKELLRLTEAIHKIAG
EKFNINSTKELRRIIFEKLGLEARGIKKTGGGEKSTRFSELLKLRGSNPIIDEILKYREL
AKLKSTYVDALPKLVGSDKRLHTTFLQTGTVTGRLASRDPNLQNIPARTELGREVRGAFY
APAGKVLLAADYSQIELRIAAILSDDKKIKDAFLAGKDIHAATAGEIFNVKENEVTPEMR
RRAKIINFGILYGMGKRALAENLGISQEEAGLYIHEYFSDFEGVRNYTQKIVEEAREKGF
VSTFFGRRRLLPEINSHLEFIRREAERMAVNMPIQGTAADMIKISMIKIHDLLNKDKNFK
GKANMILQIHDELLFEVDEEILKSAGKKIKEIMEGVLESDVPIKVELSAGPNWANLEKLE
IRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaacaaaccaaaaaactgcttgtgattcttgacgctcacgcgattttgcat
cgggcttatcacgctttgccgccctttacttctcctaagggcgagccgaccggagcgctt
tacggatttacaacaatgcttttaaaaataatccgcgagttaaaaccggactatatcgcc
gcggcctatgatatggctgagccgacttttcgccatttggctttcgaaaaatacaaagcc
acgagagccaaagttgacgatgaactgattccgcaatttaatcgttcgcgggaaatttta
aaatctttcaacattccggtttatgaagaagccggatacgaagcggatgacataatcggg
actgtttccgaaaaaaataaaaaatccaaagatttaaatattgtgattgcctccggcgat
ttagacaccctgcagctggtcagcggggataaagttcgagtttatactttgaaaaaaggc
aaggaggaatttatttacaaccagaaagaagtggaaaaacgatacggcttcggcccggaa
tttgttccggactataaaggtctggtcggcgacccgtcggataatatccccggagttaaa
ggcatcggcgaaaaaacggccaaggatttaatccaaaaattcggctcccttgaaaatatt
ttggatttagccaaaaataaaccggaaaaattaaaatccgccggaatcaaagaccggata
ataaaacttttggctgaaaacgaagaagaagccctgttttcaaagacattggcgactatt
cgtaaagacgcgaaaattaaatttgacctggataaagcccgctggtcaggatttaaaccg
aaagagattgaaaatctttttcgggaactcggttttgccagcttgatccaacgcatttct
caggcgacgggcgggaaagaagaagaaacagagagaggcaaaataaacgccgaacttgcg
tcaaaaatagaattggctttttggcttttggattcgcgccgtctgaatgtttcagccgag
gaagtagttaaatcaatgggcgtcaaagacgcgtccgaagcctacgtgtcgcttaaactt
gagatggaaaaggccggacttctcaagatttttcaggatattgaactgcccttgataggt
gttttgtgggaaatgcgcgaaaccggcatcgcgcttgatattaaaattttaaaagagctt
tccaaaaaatatgataaagaacttctgcgtcttacggaggccatacataaaatcgcgggc
gaaaaattcaacataaattcaaccaaagaattgcgccggatcatttttgaaaaattgggg
cttgaggccaggggcattaaaaaaaccggaggaggcgaaaaatcaaccagattttccgaa
cttttgaaactcaggggttcaaatcccataattgatgaaattctaaaatacagggagctg
gcgaaattaaaatcaacttatgtggacgcgcttcctaaattggtcggctccgacaaacga
ctgcatacgacttttctgcagaccggcaccgtaaccggccgtttggcgtctcgcgatccg
aatcttcagaatattcccgccagaacggagctcggccgcgaggtgcggggggcattttac
gcgccggccggaaaagttcttctggcggcggattactcccagatagaattaaggatcgca
gccattctttcggatgataaaaaaattaaagacgcttttctggccggaaaggatattcac
gcggccaccgccggcgaaatttttaatgtcaaagaaaatgaagttacgcccgaaatgaga
agacgggccaaaataataaatttcggtatactttacggcatggggaagcgggccctagct
gaaaatttgggcatcagtcaggaagaagccgggctttatatccatgaatatttcagcgac
tttgaaggcgtcaggaattatacccaaaaaatcgttgaggaggcgcgcgagaaaggtttt
gtttccacttttttcggacgcagacggcttttgccggaaatcaattcgcatttggagttt
atcaggcgcgaggcggaaagaatggccgtcaatatgcctatccagggaactgccgcggac
atgattaaaatatcaatgattaagattcacgatttgttaaacaaagataaaaattttaaa
ggaaaagcgaatatgattttgcagattcacgacgagcttttgtttgaagttgacgaagag
attttaaaatccgcgggcaaaaaaatcaaagaaattatggaaggcgttttggaatcggat
gtcccgataaaggttgaactaagcgcgggacccaactgggccaatttagaaaaattagaa
attagaaattag
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integrated database retrieval system
