Candidatus Niyogiibacteriota bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_03125
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Entry
HYY55_03125 CDS
T09897
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nbn
Candidatus Niyogiibacteriota bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Pathway
nbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYY55_03125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbn03019
]
HYY55_03125
03016 Transfer RNA biogenesis [BR:
nbn03016
]
HYY55_03125
Enzymes [BR:
nbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HYY55_03125
Messenger RNA biogenesis [BR:
nbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYY55_03125
Transfer RNA biogenesis [BR:
nbn03016
]
Prokaryotic type
tRNA degradation factors
HYY55_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
KH_N4BP1_2nd
PucR-like_N
Motif
Other DBs
NCBI-ProteinID:
QQG46652
LinkDB
All DBs
Position
complement(572650..574752)
Genome browser
AA seq
700 aa
AA seq
DB search
MQGKKYSTDIAGRKLEVEFSDLAAQANGSVLVRYGETTVFATATMAKSPRTGINFFPLSV
DYEEKFYAAGQILGSRFVRREGRPSDEAVLNGRLIDRTLRPLFNKKSRNEIHVVIMALSI
DGENDPDVPGILAASLAVATSDIPWDGPVSPLRLGIKNNEIIFNPTYAEKEESGLDLVAC
ARNGKINMIEAGAKEIPEEKIMQALKSALPEFAKIEKFQRDIIAEVGKEKMKLEFPEEPA
EFLELFTSHIKPRLEDYIYITEKPVRNTRLGELKKEWMDAVQEQFSGLVNEADDLYEKAI
DEIVHKNILEREKRPDHRKLNEIRSLYAEIGLLKRNHGSSLFFRGETHILSVTTLGAPGD
VQLIEGMETQTKKRFMHHYNFPPFSSGETGRMGSPGRREIGHGALAERALEAVIPPKEIF
PYTIRLVSETMSSNGSTSMGSVCASTLSLMDAGVPIKEPVAGIAMGLMMDSDGRFKVLTD
IQGPEDHHGDMDFKAAGTKNGITAIQMDVKVDGVTLEMLKKALEDAREARIRIMEVMLKV
LPKPRENISPHAPKIITININPDKIRDVVGPGGKTINKIIDETGAEIDIEQTGEIFITGK
NQESAERAAEAIRNLTREYEVGEEFMGKVSRIFEFGAMVEIGPKQEGLVHISELAPYRVN
KVRDIVNIGDEVPVKIISIDELGRVNLSIKQSSQYREKTK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcaaaaaatactcaaccgatatagccggacgcaaattggaagtggagttttcg
gatttggctgcccaggctaacggctcggttctggtgcgttacggcgaaaccactgttttc
gccacggctacaatggccaaaagcccgcgaaccggaataaattttttcccgctttcggtt
gactacgaagaaaaattctacgccgcagggcaaattctgggttcccgctttgttcgcaga
gagggccggccgtctgatgaagcagtgcttaacggccggctgattgaccgaaccctccgc
ccgcttttcaataaaaaatcgcgaaacgaaatacacgtggtgattatggctctttcaata
gacggcgaaaatgaccccgatgttcccggaatactcgcggcctctttggctgtggcaacc
tcggacatcccctgggacggtccggtcagcccgttaagactgggcattaaaaacaacgaa
attattttcaacccgacttacgccgaaaaagaagaatcgggattggatcttgtcgcctgt
gccagaaatggaaaaataaatatgattgaagcaggggccaaagaaattcctgaagaaaaa
ataatgcaggctctcaagagcgctctgccggaattcgcgaaaattgaaaaattccagagg
gatataatcgcggaggtcggcaaagaaaaaatgaaacttgaatttccggaagagccggcg
gaatttctggaactttttaccagccacatcaagccgcgccttgaagattacatatatata
accgaaaagcccgtgcgcaacacgcgactgggagagctcaaaaaagaatggatggacgcg
gttcaggaacaattcagcggccttgtaaacgaagccgacgacctttatgaaaaagcaatt
gacgaaatagtccataaaaacatacttgaacgcgaaaaaaggccggaccaccgcaaactc
aatgaaatacgctctttatacgccgagatcggtttgcttaaacgcaatcacggctcatct
ttatttttcagaggggaaacccatatcttatccgtcacaacgctcggagctcccggagat
gttcagctgatagaaggaatggaaacgcaaaccaaaaaacgctttatgcatcattacaac
tttccgcctttttcatccggtgaaacagggagaatgggctcgcccggccgaagagaaatc
ggacatggcgctttggccgagcgcgcgctggaagccgtcattcctccaaaagaaattttc
ccctacaccattcgtctggtttcggaaacaatgtcttcaaacggctcaacctcaatggga
tcggtgtgtgcttcaaccctgtctttgatggacgcgggcgtgccgattaaagagcctgtc
gccggaattgccatgggcttaatgatggacagtgacggccgcttcaaagttctgaccgat
attcagggtcccgaagaccatcacggcgatatggatttcaaagccgcgggcactaaaaat
ggaataaccgcgattcaaatggacgtcaaagtggatggagtaacgcttgagatgcttaaa
aaagcccttgaagacgcgagggaggcaagaatcagaataatggaagtgatgcttaaagtc
ctgcccaaaccgcgcgaaaacatttcgccccacgctccgaaaatcataaccatcaacata
aatcccgacaaaataagagacgtggtcggtccgggaggaaagaccataaataaaataatt
gacgaaaccggagccgagatagacattgaacagactggcgagatattcattaccggcaaa
aatcaggaatcggccgaaagggcagccgaagccatcagaaatctgactcgtgaatacgaa
gtgggcgaggaatttatgggtaaagtcagccgcatatttgaattcggagccatggttgaa
atcggaccgaaacaggaaggactggtgcatatttcggagctcgcgccgtatcgggtcaac
aaagtgcgcgatatagtcaacatcggcgacgaagtgccggtgaaaataatcagcattgac
gagctcggcagagtcaatctttcaatcaaacaatcttcccaataccgcgaaaaaacaaaa
taa
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