Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_03160
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Entry
HYY55_03160 CDS
T09897
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nbn
Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbn03032
]
HYY55_03160
03036 Chromosome and associated proteins [BR:
nbn03036
]
HYY55_03160
03400 DNA repair and recombination proteins [BR:
nbn03400
]
HYY55_03160
DNA replication proteins [BR:
nbn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HYY55_03160
Chromosome and associated proteins [BR:
nbn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HYY55_03160
DNA repair and recombination proteins [BR:
nbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HYY55_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QQG45954
UniProt:
A0A7T5RKR1
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All DBs
Position
581209..581481
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AA seq
90 aa
AA seq
DB search
MNKTGLVDVVYEKMGGTKKSAEDMVDLIFATIAGELKNGGEVTIAGFGSFIVKERKAREA
RNPRTGETVHVPATKAPKFRPGKALKEAVR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccggtcttgtggatgtcgtctacgaaaaaatgggcggcacaaaaaaatca
gccgaagatatggttgatttgatttttgctacaatagcgggcgagctgaaaaatggcggc
gaagtgactattgccggcttcggctcgtttatcgttaaagaacgtaaggcgcgcgaggcg
cgaaatccgcgcaccggagaaaccgtgcatgttccggcaaccaaagcgccgaaattcagg
cccggcaaggctttgaaggaggcggtcagataa
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