Nocardia brasiliensis: O3I_003550
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Entry
O3I_003550 CDS
T02270
Name
(GenBank) putative DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nbr
Nocardia brasiliensis
Pathway
nbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O3I_003550
09124 Replication and repair
03420 Nucleotide excision repair
O3I_003550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbr03021
]
O3I_003550
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_003550
Enzymes [BR:
nbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O3I_003550
Transcription machinery [BR:
nbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
O3I_003550
DNA repair and recombination proteins [BR:
nbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
O3I_003550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFT98672
UniProt:
K0EHB3
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All DBs
Position
785656..787293
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AA seq
545 aa
AA seq
DB search
MQSDKTLLLEVDHELADAARQAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV
DALVSFSRYAVPQPLLVDVVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVLRHKKIAP
MLGARLDDDTVVVHASERGRIKQMLLKIGWPAEDLAGYVDGEAHPIELDYGDDKWHLRDY
QELAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWRRELLART
SLTEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYDEVHLLPA
PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCVE
VRVTLTDAERMAYATAEPEERYKLCSTAHTKIPVVQSILAKHADAPTLVIGAYLDQLDEL
GAALNAPVIQGSTKTKEREELFEAFRQGEVPVLVVSKVANFSIDLPEASVAVQVSGTFGS
RQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRITDADDLL
GPAIG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagtgacaagacgttgctgctggaggtcgaccatgagttggccgatgcggcgcgg
caggccatcgcgccgttcgccgagctggagcgggcgccggagcacgtgcacacctatcgg
gtgacgccgttggcgctgtggaacgcgcgggcggcggggcacgacgccgagcaggtggtg
gacgcgctggtcagcttctcccggtacgcggtgccgcagccgctgctggtggacgtggtg
gacaccatggcccggtacggacggctgcagctggtcaagcatccggcgcacggtttgacg
ctggtcagcctggatcgcgcggtgctggaagaagtgctgcggcacaagaagatcgcgccg
atgctcggcgccaggctggacgacgacacggtggtcgtgcacgcctccgagcgcgggcgg
atcaagcagatgctgttgaagatcggctggcccgcggaggacctggccgggtacgtcgac
ggcgaagcgcaccccatcgagctggactacggcgacgacaagtggcatctgcgcgactac
caggagctggccgccgactcgttctgggcgggcgggtccggcgtcgtcgtgctgccgtgc
ggcgcgggcaagaccatggtcggcgcggccgcgatggccaaggcgaaggcgaccacgctg
atcctggtcaccaacaccgtggccggtcggcagtggcggcgcgagctgctggcacgcacc
tcgctcaccgaggacgagatcggcgagtactcgggcgagcgcaaggagatccgcccggtc
accatcgccacctatcaggtgatcacccggcggaccaagggcgagtacaagcacctggaa
ctgttcgacagccgcgactggggcctggtcatctacgacgaggtgcacctgctgcccgcg
ccggtcttccggatgaccgccgacctgcagtcgcgtcggcgcctcggcctgaccgcgacc
ctggtccgggaggacggccgcgagggcgatgtcttctcgctgatcggcccgaagcgctac
gacgcgccgtggaaggacatcgaggcccagggctggatcgccccggccgactgcgtcgag
gtgcgggtgacgctcaccgacgcggagcggatggcctacgcgacggcggagccggaggag
cgctacaagctgtgctccaccgcgcacacgaaaataccggtggtgcagtcgattctggcc
aagcacgcggacgcgccgacgctggtgatcggcgcgtacctggaccagctcgacgaattg
ggcgccgcgctcaacgccccggtgatccagggttcgacgaaaaccaaagagcgagaagag
ctcttcgaagccttccggcagggtgaggttcccgtgctggtggtgagcaaggtggcgaac
ttttccatcgatctgccggaagcgtcggtcgcggtgcaggtttcgggtacgttcggttcc
cgtcaggaggaggcgcagcgcctcggtcggctgctgcggccgaaacacgatggcggccaa
gcgcacttctattcggtggtggcaagggacaccctcgacgccgaatatgccgcgcatcgc
cagcgttttctcgccgaacaggggtatgcctatcgcatcaccgacgcagatgatctgctc
ggtccggccatcggataa
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