Nocardia brasiliensis: O3I_010025
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Entry
O3I_010025 CDS
T02270
Name
(GenBank) excinuclease ATPase subunit
KO
K03701
excinuclease ABC subunit A
Organism
nbr
Nocardia brasiliensis
Pathway
nbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O3I_010025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_010025
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O3I_010025
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O3I_010025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
nSTAND1
AAA_29
AAA_16
HUTI_composite_bact
DUF4350
AAA_25
DnaJ_CXXCXGXG
AAA_33
APS_kinase
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFT99965
UniProt:
K0EWJ4
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All DBs
Position
2280387..2282873
Genome browser
AA seq
828 aa
AA seq
DB search
MSMSEVRLPKAVEVVGARTHNLRNIDVDVPLWSLVMLTGLSGSGKSSLAMGVLYGEGSRR
YLDGLSAYTRRRIGQVARPDVDRVDFLPSALALRQRPPVPGRRSTVGTMTEVLNVARLMF
SRLGRHVCPNGHRIEPNLVRSAQLWLDCPVCGAHFEHPSAESFSFNTLGRCPGCDGLGVR
DEIDTATLIPDDSLSVLEGAVAPWNLAGRSYMPQVAADLGVRIDVPVAELTDAERAILLD
GPPEPRLVTLTSKAGRAVSANMTYESARRAVQNAATKTTSETTRQRLSRFFTTHTCPVCQ
GSRLRPEALTTTLSDRDIAQVSAESLDALADFAEQVAVTLPAEMRPLSDRLAEELTAAVE
PLRRLGIGYLSLDRAGATLSTGERQRIELLSTLQARSTGMLYVLDEPSVGLHPANVDGLR
AVLRGLVAAGNSVVVVDHDVALLREADHLIEMGPGAGRQGGTVVAQGSAADLAACADSVT
GPYLSGSAGTQFRAPHPIDTAALEITVDGLYTLRDVSARIPLRRLTVVTGVSGSGKTALV
LDSLVPALTADVPPAHVRLLDRAGIRAVVEVDATPIGNNSRSTPVTYSGALDPIRRWFAR
ESGRTAAHFSYNTAAGQCPTCLGLGELDLDIQYLPDLTVSCPDCHGARYNPEVRAVTVDG
LTIADVLSLTVAEAVDRFAAHPKIVAPLRAVRDVGLGYLCLGEPTPSLSGGEAQRLRLAT
ALRSEQADTLYVFDEPSIGLHPNDVRTLLAVLDRLIDAGATVLVIDHDLDVIANADHIID
LGPGGGPDGGRIVATGTPAEITAAADSRTGYWLGRHLAGRGADSVRTV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatgtccgaagtgcggttgccgaaggctgtcgaggtggtgggtgcgcgtacgcac
aacctccggaatatcgatgtggacgtccccctctggtcgttggtgatgttgaccggactg
tcggggtcggggaagtcgtcgctggcgatgggggtgctgtacggggaggggtcgcggcgg
tacctggacgggttgtccgcgtacacgcggcgccggatcgggcaggtggcccgtccggat
gtggatcgggtggattttctgccgtcggcactggcgctgcggcagcgcccgccggtgccg
gggcggcgcagcacggtcgggacgatgaccgaggtgctgaatgtggcgcggctgatgttt
tcccggctcggccggcatgtgtgcccgaacgggcatcggatcgagccgaatctggtgcgc
agtgcgcagctgtggctggactgcccggtgtgtggcgcgcatttcgagcatccgagcgcg
gaatcgttctcgttcaacacgctgggccggtgccccggctgcgacggcctcggggtgcgc
gacgaaatcgacacggcgacactgattcccgacgacagcctgagcgtcctcgaaggcgcg
gtagcgccatggaatctggcaggccgcagctatatgccgcaggtggccgcggatctcggg
gtgcggatcgatgtgccggtggcggaattgaccgacgcggagcgggcgattctgctcgac
ggcccgcccgagccgcgccttgttactctcaccagcaaggcaggtcgcgcggtgagcgcg
aacatgacctacgaaagtgcccgtcgcgcagtgcagaacgcggcgacgaaaaccacgagt
gaaaccacccgccagcgtttgagcaggttcttcaccacgcacacctgtccggtttgtcag
ggcagcaggttgcggcccgaggcgctgacgacgacgctgtcggaccgcgacatcgcgcag
gtgagtgccgaaagtctggacgcgctggccgatttcgcggaacaggtggcggtgacactg
cccgccgagatgcggccactgtcggatcggctcgccgaggagctgaccgcggccgtggaa
ccgttgcgccggttgggcatcggatacttgagcttggatcgggccggggcgacgttgtcg
acgggggagcggcaacggatcgagttgttgtcgacgttgcaggcgcgttccacgggcatg
ctctacgtgctggacgaaccatcggtcggcctgcatccggccaatgtcgacggattacgc
gcggtactgcgtgggcttgtcgcggcgggcaattcggtggtggtggtcgatcatgacgtc
gcgttgctgcgcgaagccgatcacctgatcgagatggggccgggggcgggcaggcagggc
gggacggtggtcgcgcaggggagcgccgccgatctcgcggcatgcgcggattcggtgacc
ggaccgtacctttccggcagtgccggaacgcaattccgcgccccgcacccaatcgacacc
gccgcactggagatcaccgtcgacgggctgtacaccctccgcgatgtcagcgcgcgaatc
ccgctgcggcgcttgaccgtagtgacgggcgtgtccggatcaggcaagacggcactggtg
ttggacagcctcgttcccgcgctcaccgcggacgtaccgcccgcgcatgtgcggctactc
gaccgcgcgggtatccgcgccgtggtcgaggtggacgccactccgatcggcaacaactcc
cggtcgaccccggtcacctacagcggcgcactcgacccgatccgccgctggttcgcccgg
gaatccggccgcaccgccgcgcacttctcctacaacaccgcggcgggacagtgcccgacc
tgcctgggcctcggcgagctggatctcgacatccagtatctgcccgatctcacggtcagc
tgcccggactgccacggcgcccgctacaacccggaggtgcgtgccgtcaccgtcgacggc
ttgaccatcgccgatgtgctgtcgctgacggtggccgaggcggtcgaccggttcgccgcg
cacccgaagatcgttgcgccccttcgtgcggtgcgtgatgtcggcctcggctacctgtgc
ctcggcgagcccacgccgagcttgtccggtggtgaggcccagcgactgcgcctggccact
gcgctgcgctccgagcaggccgatacgttgtacgtcttcgacgaaccttcgatcggattg
caccccaacgatgttcgtactctgctcgccgtcctggatcggctgatcgacgcgggcgca
acggttctcgtcatcgatcacgatctggacgtgatcgccaacgccgaccacatcatcgat
ttaggacccggcggtggtccggacggcgggcggatcgtcgccaccggcacaccggccgag
atcaccgcggcggccgacagccggacgggctactggctcgggcgtcatctcgccgggcgg
ggagccgactctgtgcgtacggtctag
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