Nocardia brasiliensis: O3I_010275
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Entry
O3I_010275 CDS
T02270
Name
(GenBank) sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nbr
Nocardia brasiliensis
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbr03021
]
O3I_010275
Transcription machinery [BR:
nbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O3I_010275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
MarR_2
HTH_24
HTH_Tnp_4
MarR
KORA
HTH_Crp_2
HTH_3
Trypco1
HTH_31
Sigma70_ECF
Trp_repressor
HTH_37
DUF7343
HTH_Tnp_ISL3
HTH_10
HTH_7
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AFU00016
UniProt:
K0EWN5
LinkDB
All DBs
Position
complement(2333305..2334144)
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AA seq
279 aa
AA seq
DB search
MQREFTKDEAGRAPRTHSRGDSYDNIEPWFEKLTALDPDDPHRSELREEVTQRCLPLAEH
IARKFAGRGESFDDLHQIARVGLVLAVDRFDVTRGSSFLSFAVPTIMGEVRRHFRDNTWA
VRVPRRLKEIQQQIGPATELLSNRLGRVPTAREIAAELSLDVGTVTQALIASNGYQTRSL
DAVVREDSENAPLPAAAGLGADEPCYRLLEESMTVRPLIAALPERERRVLIMRFFESLTQ
AQIAERLGVSQMQVSRILSKTLDTLREQALEPERSVDVA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgagttcacgaaggacgaggccggccgcgcaccgcgcacccactcccggggc
gacagctacgacaacatcgagccctggttcgagaagctgaccgcgctcgaccccgacgac
ccgcaccgcagcgaactacgcgaagaagtcacgcagcggtgcctgccgctggccgagcac
atcgcgcgcaagttcgccggtcgcggtgagagcttcgatgatctgcaccagatcgcccgg
gtgggtttggtgctcgcggtggaccgcttcgatgtcacgcgcggcagttcgttcctctcc
ttcgcggttccgacgatcatgggcgaggtgcgcaggcacttccgggacaacacctgggcg
gtgcgagtcccccgtcggctcaaggagattcaacagcagatcggaccggccaccgaactg
ctgtcgaaccggctcggccgggtgccgacggcgcgggagatcgccgccgagttgtccctc
gacgtcggcacggtcacccaggcgttgatcgcgagcaacggctatcagaccaggtcactg
gatgccgtggtgcgcgaggacagcgaaaacgcgccgctgcccgccgccgccgggctcggc
gccgacgaaccgtgctaccggctgctggaggagtcgatgacggtacggccgctgatcgcc
gcgctacccgaacgggagcgccgggtgctgatcatgcgcttcttcgagtcgctcacccag
gcgcagatcgccgaacggctcggtgtctcgcagatgcaggtgtcgcgcatcctgtccaaa
accctcgacaccctccgcgagcaggcgctcgagccggagcgatcggtggacgtggcctga
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