KEGG   Nocardia brasiliensis: O3I_015570
Entry
O3I_015570        CDS       T02270                                 
Name
(GenBank) sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
nbr  Nocardia brasiliensis
Brite
KEGG Orthology (KO) [BR:nbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nbr03021]
    O3I_015570
Transcription machinery [BR:nbr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     O3I_015570
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 KORA HTH_31 HTH_Tnp_4 HTH_3 Sigma70_ECF MarR_2 HTH_Crp_2 HTH_37 Trp_repressor HTH_19
Other DBs
NCBI-ProteinID: AFU01075
UniProt: K0EW20
LinkDB
Position
3479792..3480646
AA seq 284 aa
MSLRFRATNRSEVYVMAAFSAVRKTADRRHGADSYDDIEPALLELSDLDRDDPGYSALRA
TIVRRCLPLADHIARRFSGRGETYDDLYQIASVGVVLAVDRFDPSRGSPFLAFAVPTIMG
EVRRHFRDHTWAVRVPRRVKETQQRIGPTVELLSHRFGRPPTAMELAIELDLDLTEVTQA
LIATNCYRTDSLDPAAEAGSDTGAAAFAENLGDEDGNYELTENALAVAPLLAALPEAERR
ILHMRFFEGLTQAQIGEQCGVSQMQISRILSRTLHALRTEALAD
NT seq 855 nt   +upstreamnt  +downstreamnt
gtgtcgttgcggttccgtgcgacgaaccgaagcgaggtctacgtgatggctgctttctcg
gcagtacgaaagaccgccgaccgacggcacggcgcggacagttacgacgacatcgaaccg
gcactgctcgaattgtcggacctggatcgtgacgatcccggctattcggcgctgcgggcg
acgattgtgcgccgctgcctgccgctggccgatcacatcgcgcgccgcttcagcggccgg
ggcgagacctacgacgacctctatcagatcgcgtccgtgggcgtcgtcctggcggtcgat
cgtttcgatccgtcgcggggcagcccgttcctcgccttcgcggtgcccacgatcatgggc
gaggtgcggcggcatttccgtgatcacacctgggcggtccgggtgccgcgccgggtcaag
gaaacccagcagcggatcgggccgacggtggagttgctgtcgcaccggttcggccgcccg
ccgacggcgatggaactcgcgatcgagctcgacctcgatctgaccgaggtcacccaggcg
ctgatcgccaccaactgctaccggaccgattcgctggatccggcggcggaagccggaagt
gatacgggcgctgcggctttcgccgagaacctcggtgacgaagacggaaactacgaactc
accgagaacgccctcgccgtcgcgccgctgctggcggccttgcccgaggcggagcgccgc
atcctgcacatgcgcttcttcgaagggctcacccaggcgcagatcggtgagcagtgcggg
gtctcccagatgcagatctcccgaatcctgtcgcgcacactgcacgcgctgcgcaccgaa
gccttggccgactga

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