Nocardia brasiliensis: O3I_019140
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Entry
O3I_019140 CDS
T02270
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nbr
Nocardia brasiliensis
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbr03032
]
O3I_019140
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_019140
Enzymes [BR:
nbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
O3I_019140
DNA replication proteins [BR:
nbr03032
]
Prokaryotic type
DNA Topoisomerases
O3I_019140
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O3I_019140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
AFU01787
UniProt:
K0EWH0
LinkDB
All DBs
Position
complement(4288944..4289954)
Genome browser
AA seq
336 aa
AA seq
DB search
MRLRRSTPYGPGLRRVARGRGFSYVSTEGARVADEAALERIRGLVIPPAWRKVWICPHDN
GHIQAVGVDAAGRRQYLYHEQWRKERDEEKFDRVLHLAAGLPELRRRIHAELTEPGLGLR
RVAALAVTLVDRGVFRVGGEEYAQEHGTRGVATLLREQVRLSGAEMSFDYPAKGGIQRRV
RIRDADSARVVRSLRRCRHDSPRLLVYRKGSRYCELHADDINDLFREWSESECSVKDLRT
WHGTVLAAAGFGSVERPDSQRGRKAVERTVIADVAAALGNTPAVARASYVDPRVLTAFER
GATISAALRRAARGGSDEQRQNTVERAVIRLLRTTN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcgacgcagcacgccgtacgggcccggcctgcgccgagtggcgcgcggacgt
ggtttctcctacgtgagcaccgagggcgcccgggtcgcggacgaggcagcgctggagcgc
attcgtggcctggtgataccgcccgcgtggcgcaaggtgtggatctgcccgcacgacaac
gggcacatccaggcggtcggggtcgacgccgcgggccggcgccagtacctctatcacgaa
cagtggcgcaaagagcgcgacgaggagaagttcgatcgcgtcctccacctggccgccgga
ctaccggaactccgccggcgcatccacgccgaactgaccgagcccggcctggggctgcga
cgggtggccgcgctcgccgtgacgctggtggatcggggcgtattccgggtcggcggtgag
gaatacgcgcaggagcacgggacgcgcggggtcgcgaccctgctgcgcgagcaggtccgg
ctgtccggtgccgagatgtcgttcgactatccggcgaagggcggtatccagcgccgggtg
cggattcgcgacgccgactcggcccgcgtcgtgcggtcgctgcgccgctgccggcacgac
tcgccacggctgctcgtctaccgaaaggggtcgcggtactgcgagctgcatgccgacgat
atcaacgacctgttccgggagtggtccgaaagcgagtgcagcgtaaaggatctgcgcacc
tggcacggcacggtactggccgcggcgggtttcggctcggtcgagcggccggactcgcag
cgcggacgcaaagcggtggagcgcacggtgatcgcggatgtcgctgcggcactgggcaat
accccggccgtcgcgcgggcgtcctatgtcgatccccgcgtactgaccgccttcgagcgc
ggggcgacgatctcggccgccttgcgccgtgcggcccggggcggttcggacgagcaacgc
cagaacacggtcgagcgcgcggtgatccgcctgctgcgcaccacgaactga
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