Nocardia brasiliensis: O3I_022600
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Entry
O3I_022600 CDS
T02270
Name
(GenBank) putative Rhs protein
Organism
nbr
Nocardia brasiliensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T7SS_signal
RHS_repeat
DUF6531
DUF4595
WXG100
Motif
Other DBs
NCBI-ProteinID:
AFU02475
UniProt:
K0EZY5
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All DBs
Position
5137024..5143806
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AA seq
2260 aa
AA seq
DB search
MGLWDVVNDIGNAIEDGVEAVVEGVGQVADDALDLLSDGAKAIGLDGIAEGLDDLGDNIA
AGTGGDVEEEELGETEDPKELIRGEPTEISSTAQTLQKMATAIDSTGQALKQIDAAEWVG
DGADAFNAVYDKQPKLWFDCADAFTSAAKAMEAWHNEVKTGQGKAADAIDKWKAADAEER
RQKNWWNSLTGEQQAQTTLVDTWTSMRNEAREILRGARTQRDNGASIAVGALSAATDKAP
KEPPFTDRWIANLSDMGGVLEHGALNFTSGLLTSFTGLVQFVRQVNPTDIYNMTHPAEYA
AGLSDLATGLVVAVADPGATVSAILSDARKNPFEFMGALTGDALLTAATGGGGSAKVAVS
ALRKMKDAGRLARVADDVGDVGRHLPNSTHTPSGTPSHMSMETSQRPAPTRVDNGHTPTD
TNPVQASNRPETHAPRHENVGGANDSATERPHRPESPASGPAHHAPDPAPTRHEDPDPAP
SSHADPSPTSHTDSSPTPNQHADPGPDRSPVTHRDPDPAPSPHTNADPTPAARPDSDPPP
HRTDPRPEALRPTTHTDNPSTVHPDPGHAPHSRTDADSPHANSNAPQANPETRSPHVSAD
TTPNTHANPDTTRTPHTDTTPGTRDNSDATRSPGANSDATPDTRANPDSTRSPRENPEAA
PDARANPDPTRSPQANSEAAPRVRTDPDHASTTNPDQAPPARADSGATPHQTDPTSVRPH
TPDTQPGPARQPDPAPVWQTGPWSHPDPPAPYPRPDPAPGVRAQPDPTRAYSDLPSSSRP
EPGARTPLDRTPAGRAQPDPATRPFADPKPDARPHRDTIPTNRADPSTARPTPDRAPQRA
HAEPSARTQPDQPGRHADPHANRPTPHQDPSRTPDSGDRHQRPHRHDDPRRDSRPDLDHP
RDRDHRPTRDPEHDRPRDLDDTPRERHPENDRRPTHDRGPGHQRGPDDSPRDRHPDRTDN
RDRPHDPEHSPRDRHSDRDHERTRDREHDNDRPRDLDDAPRDRHTDRDRPHDPDNPPREY
RDPDADHPARDRAEADRNAHEHARESGPEADRTPAQRTCSTDPVDISTGEFLLPDTDLDL
PGVLPLTLQRAHHSNYRFGRWFGPSWSSTLDARIVVEDAGVTFIGENAMMLAYPHAEVGV
PVHPLTEGQQWSLTRTDTGGYRVWDQRAEVLWHFAPELGLDGIEARFGNYAISAITDRHR
NRIRFHYDADGVPVEVTHSGGYRVRIDSDGARITGLSLLSDDPESSTRVLEFTYAGTDLV
AVTDADGATTRYTYDVEHRMTSWADANGNQMVNTYDEAGRVAFQRGTAGMLNCDYDYLEL
PDGTGRLTMVTDSFGATTSHGFDRELQLRDLVDPIGGRTHIDYNADRRPLTVTGPDGATT
RYQYNGAGDCAKVVRPDGYSTEVEYLWRNRPLTITSPDGSVTRREWSTDGNLAAAVDTMG
NRTEFTYHPNGALASVVEANGARTTFQVDQAGLLTQVTEPHGAVTHIRRDAAGRTTHIID
PLGEVTRFDWSAAGKLLRRTDPDGRSESWTYDGEGNIRSRTDRTGAVTRLVYGDFDLLRS
RTDPDGSTTRYTWDTERRLVAVHNPIGQNWTYEYDSAGRLVAETTYSGATTRYAYDRAGR
VNAITPATGATRHQHHDVLGRLTEISAGDEWVRYTHDPAGRVLAAVNGVGADLTHRLEFA
YTAIGAVVSEKLDANPPMLFEHDRRGHRTRRTTPSGAVATWHHDVTGRLDHLNADDHDIT
FDYDPLGRLTTWRVGEVAVTRGLTTLGRVTHQEVTAFPPRSLSLEAGPSARPDPTRLRRD
EFAYRPDGYLISHTIDRPQTNPLRRDYQLDPAGRVTTVSTDGAPTERYTYDALDNITSAT
VSAPTPGGKPDFPPDNGRREYRGALLVRDGRTRFHYDAAGRLIRKTTVRLSRKPDVWHYR
YNAFDQLTDAWTPDRQWWHYTYDALGRRTTKQHLATDGTVLERVDYLWDGTHLIEQSSGT
ATVRWQYQPGSHTPLTQSTDQGTVDREFYAIVADLVGAPAELVDPATADTVAEAHTDLWG
RTTWRGRTGSPLRFPGQIHDPETGLHYNMFRYYNPDTGQYLTPDPLGLDPAPNPYAYTSN
PLRFIDPLGLTPTACERFANFYRKVTPKELQRAPAPYPGGRIGHALQKHGVTPEVQASIL
NNPQRIFSGDYHGKHHVTKEPYIRPVDVYYSKGSIVVTEAGNKNSVITAYGLIDKNEKKP
KALKPEKWAESEHYVEITRNNGAHEVVYPTRESWEGNSWQ
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
ttgggactctgggatgttgtcaacgacatcggcaacgcgatcgaggacggtgtcgaagcg
gtcgtcgagggcgtcggacaggtcgccgacgacgcgctggacctgctctccgacggcgcg
aaggcgatcggcctcgacggcattgccgagggcttggacgacctcggcgacaacatagcc
gccgggaccggcggcgacgtcgaggaggaagaactcggcgagaccgaggatccgaaagaa
ctgatccgcggcgagccgaccgaaatcagctccaccgcacagaccttgcagaagatggcc
accgccatcgattcgaccgggcaggcgctcaagcagatcgatgccgccgaatgggtcggc
gacggcgcggacgcgttcaacgcggtctacgacaagcagccgaaactgtggttcgactgc
gccgacgccttcacctcggcagccaaggcgatggaagcctggcacaacgaggtgaagacc
ggacagggcaaggccgccgacgccatcgataagtggaaggccgccgacgcggaggaacgc
agacagaagaactggtggaactcgctcaccggcgaacagcaggcgcagaccacgctcgtc
gacacctggacgtcgatgcgcaacgaagcgcgagagatcctgcgcggagcgcgaactcag
cgtgacaacggggcgtccatcgccgtgggcgcgctcagcgccgccaccgacaaggcgccg
aaggaaccacctttcaccgaccgctggatcgccaacctctcggatatgggcggcgttctc
gaacacggggcgttgaacttcacctccgggctgctcaccagcttcaccggactcgtgcag
ttcgtgcgtcaggtcaacccgaccgacatctacaacatgacccaccccgccgaatacgcg
gccggcctctccgatctcgcgacgggactggttgtcgcagtggcggatccgggcgcgacg
gtctcggcgatactgtccgacgccaggaagaatccgttcgaattcatgggcgcgctgacc
ggtgacgcgctgctcaccgccgctaccggcggtggcggtagcgccaaggtcgccgtcagt
gcgctgcggaaaatgaaggacgcgggccggctcgcccgtgtcgccgacgatgtcggcgac
gtcggacggcacctgcccaattcgacgcacaccccgagcggcacgccgtcgcacatgtcg
atggagacctcgcagcgacccgcgcccacccgggtggacaacgggcatacgcccaccgac
accaacccggtgcaggcgagcaatcgtccggagacccacgccccgaggcacgaaaatgtc
ggcggtgcaaacgattcggcgaccgagcgaccccatcggccggagtccccggcctcgggt
ccggcgcaccacgcgcccgatccggcacccactcggcacgaggatccggaccccgcaccg
agctcgcatgccgacccctcccctacctcgcataccgactcctcgcccaccccgaaccag
cacgcggatcccggccccgaccggtcgccggtcacccaccgcgatcccgaccccgcaccg
tcgccacacacgaacgcggacccgaccccggccgcgcgccccgactcggatccaccaccg
catcgcaccgacccccggccagaggcgttgcgccccacgacccacaccgacaacccctcg
acggtgcaccccgatcccggacacgcaccccattcccgcaccgacgccgactcgccgcac
gccaattccaatgcgccgcaagcaaaccccgagacacgatccccgcacgtcagcgccgac
accacaccgaacacccacgcgaaccccgacaccacacgaacgccgcacaccgacaccaca
ccgggcacgcgtgataactccgatgcgacacgatcaccgggcgcgaactccgacgccaca
cccgacacgcgcgcaaaccccgactccacgcggtcacctcgagagaaccccgaagcggca
cccgacgcacgagcgaaccctgaccccacacgatcgcctcaggcgaattccgaagcggcg
ccgcgtgttcgcaccgacccggaccacgcttcgaccacaaacccggaccaagcgccgccc
gcacgcgccgactccggggccacgccacatcagaccgacccgacgtcggtccgcccgcac
acgcccgacacgcagccgggccccgcacgccaacccgatcccgcacctgtctggcagacc
ggtccgtggtcgcatcccgaccctccggcgccgtacccccgcccggatcccgcaccgggt
gtccgcgcgcagccggaccccacgcgcgcctactccgatctcccctcttcgtcacgaccg
gaacccggggcccgcaccccgctggatcgaacgcctgccggacgggcgcagccggacccc
gccacgcgtcccttcgcagatccgaaaccggacgcccgcccgcaccgcgacacgatcccc
accaaccgtgccgacccgtcgactgcccggcccactcccgaccgcgctccacagcgcgca
cacgctgaaccttcggcccgcacgcaaccggaccaaccgggtcggcacgccgatccccac
gcgaacaggcctacgccccatcaggatccgtctcgcacaccggatagcggtgaccgccat
cagcgcccgcacaggcacgacgacccacgacgcgattctcggcccgacctggatcacccg
cgtgaccgcgaccaccggccaacccgcgaccccgaacacgaccgtcctcgcgacctcgat
gacacaccccgcgaacgccacccggagaacgaccgccgaccaacccacgatcgtggcccc
ggccaccagcgcggaccagacgattcgccgcgcgaccgccaccccgaccgcaccgacaac
cgcgaccgcccacacgaccccgagcactcaccgcgggaccgccactccgaccgcgaccac
gaacgcacccgggaccgcgaacacgacaacgaccgcccccgcgacctcgacgacgcaccc
cgcgatcgccacaccgaccgcgaccgtccgcacgatcctgacaacccgccgcgggagtac
cgcgaccccgacgccgatcatcccgcccgggatcgcgccgaggccgaccggaatgcgcac
gagcacgcgcgagagtcgggccccgaggccgatcggacaccggcacagcggacctgttcc
accgacccggtcgatatcagcaccggcgaattcctgcttcccgacaccgatctcgatctg
cccggtgtgctgccgctgaccttgcagcgggcccatcattcgaattacaggttcggacgc
tggttcggtccgtcgtggtccagcacgctggacgcgaggatcgtggtcgaggacgcgggt
gtcacgttcatcggcgagaacgcgatgatgctcgcctacccgcatgccgaggtcggcgtt
ccggtgcacccgctcaccgaagggcagcagtggtcgttgacccgcaccgataccggcggg
taccgggtatgggatcaacgagcggaggtgctctggcatttcgcgccggaactggggctc
gacggcatcgaggccagattcggcaactacgcgatctcggcgatcaccgaccggcaccgc
aaccgtatccgtttccactacgacgccgacggtgtgccggtcgaggtcacacactcgggc
gggtatcgggtccggatcgattcggacggtgcgcggatcaccggcctgtcgctgctctcc
gacgatcccgaatcgtccacccgggtgctggagttcacctacgccggaacagatttggtc
gcggtcaccgatgccgacggagccaccacccggtacacctacgacgtcgagcaccggatg
acgtcgtgggccgatgccaacggcaaccagatggtgaacacctacgacgaggccggtcgc
gtcgctttccagcgcggcaccgccggaatgctgaactgcgactacgactacctggaactc
cccgacggcaccggccggctcaccatggtcacggattcgttcggcgccaccacgtcgcac
ggcttcgaccgcgaactgcaactgcgtgatctcgtcgacccgatcggcggccgcacgcac
atcgactacaacgccgaccgcaggccgctgaccgtcaccggtccggacggcgcgaccacc
cgctaccagtacaacggcgcgggtgactgtgcgaaagtcgttcgaccggatgggtattcg
accgaggtcgagtatctctggcgcaaccgtccgctcaccatcacctcgcccgacggttcg
gtaacgcgccgggaatggtccacagacggcaatctcgccgcggcggtcgacaccatggga
aaccgcaccgaattcacctatcaccccaacggcgcactggcgtccgtcgtcgaagccaac
ggtgcccgcaccacctttcaggtggatcaggccgggctgctgacccaggtcaccgagccg
cacggcgcggtgacgcatatccgccgcgacgccgcaggccgtaccacccacatcatcgat
cccctcggcgaggtcacccgcttcgactggtctgccgccggaaagctgctgcgcagaacg
gatcccgacgggcgcagcgaatcgtggacctacgacggcgagggcaacatccgcagtcgc
accgatcgcaccggcgcggtcacccggctcgtgtacggcgatttcgacctcctgcgctcc
cgaaccgatccggacggctcgaccactcgctacacctgggacaccgaacgccgcctcgtc
gccgtacacaacccgatcggccagaactggacctacgaatacgacagtgccggaaggctg
gtcgccgagaccacgtacagcggcgcgaccacccgatatgcgtacgaccgcgcggggcgg
gtcaacgcgatcaccccggcaaccggcgcgactcgtcaccagcaccacgacgtcctcggc
cgcctgacggagatttccgcgggcgacgagtgggtccgctacacccacgacccggcaggc
cgcgtcctggctgcggtgaacggcgtcggcgcggatctcacccatcgtctcgaattcgcg
tacaccgcaatcggtgccgttgtgtccgagaaactcgacgccaacccgccgatgctcttc
gaacacgacaggcgcggccaccgcacgcgccgaaccacaccttcgggcgccgtcgccacc
tggcaccacgatgtcaccggccgcctcgaccatctcaacgccgacgaccacgacatcacc
ttcgactacgacccgctcgggcggctgaccacctggcgggtaggcgaagtggccgtcacg
cgtggtctcaccaccctcggccgagtgacgcaccaagaggtgaccgcctttccgccacgc
tccctgtcactggaagccgggccgtcggctcgaccggacccgacccgccttcgtcgcgac
gaattcgcctatcgcccagacggatacctcatctcccacaccatcgaccgtccgcagacc
aaccccttgcgacgcgattaccaactcgaccccgccggtcgggtcaccaccgtttcgacc
gatggcgcgcccaccgagcgctacacctacgacgcactcgacaacatcaccagcgccacc
gtgtcagcaccgacacctgggggcaaacctgactttccgcccgacaacggtcgtcgcgag
taccgcggcgctctcctcgtccgggatggccgcacccggttccactacgatgccgccgga
cggctgattcgcaaaaccactgtccggctgtcccggaaaccggacgtatggcactaccgc
tacaacgctttcgaccaattgaccgacgcttggacgccggatcgccagtggtggcactac
acctacgacgccctcggccgccgcaccaccaaacaacacctcgctaccgacggcactgtc
ctggagcgcgtcgactatctctgggacggcacacatctcatcgagcagtccagcggtacc
gcgaccgttcgctggcagtaccaacccggctcacacacgccgctcacccagtcgaccgac
cagggcacggtcgatcgcgagttctacgcgatcgtcgccgatctcgtaggtgcccccgcc
gaattggtcgaccccgccaccgccgacactgtggccgaggcacacaccgatctatggggc
cggacgacttggcgcgggcgaaccggctcaccgttacggttccccggccagatccacgac
cccgaaaccggcctgcattacaacatgttcaggtactacaacccggacaccggccagtac
ctgacacccgatccgctcgggctggaccccgcaccgaacccgtacgcctacaccagcaat
ccgctccggttcatcgacccactcggtttgacgccgaccgcgtgtgaacgcttcgccaac
ttctaccggaaggtcacgccgaaggaactgcaacgggcaccggccccctaccccggtggc
cgaatcgggcacgcgctgcagaaacacggtgtcacccctgaggttcaagcatcgatcctc
aacaacccgcaacggatcttcagcggggattaccacggcaagcaccatgtcaccaaggag
ccctacatccgccccgtcgacgtctactacagcaaaggctcgattgtcgtcaccgaggca
ggcaacaagaactccgtcatcacggcctatggtttgatcgacaagaacgaaaagaagccg
aaagcgctcaaaccggaaaaatgggccgagagcgagcattacgtcgaaatcacccgtaac
aacggcgctcatgaagtggtgtatcccacgcgggagagctgggaagggaacagctggcag
tga
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