Nocardia brasiliensis: O3I_027410
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Entry
O3I_027410 CDS
T02270
Name
(GenBank) RecB protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nbr
Nocardia brasiliensis
Pathway
nbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O3I_027410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_027410
Enzymes [BR:
nbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O3I_027410
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O3I_027410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AFU03431
UniProt:
K0F7H5
LinkDB
All DBs
Position
complement(6252166..6255591)
Genome browser
AA seq
1141 aa
AA seq
DB search
MTVQDTSFVVPEVDGPDAFEPYGPLPTGTTVLEASAGTGKTHAIVGLAVRYVAEAVIDVA
ELLLVTFSRAATQELRERTRDRFVLVAAGLADPELARAHADDLVRYLAQADPAEVRRRRA
RLLAALSDFDAGTIATTHSFCQRMLDELGLAGEHDPGARLVESVDELVGTVADDLYLNRY
ARAEPPFTVKESHTLALAAVQDRHAMLVPAGESAAGERVAFATAVRAETERRKRLAGLRD
FDDLLVLLHEVLADPDHGPRACRRIRARYRVALVDEFQDTDPLQWDILRLAFHGHTTMVL
VGDPKQAIYAFRGAEVLSYLDAVAHADTRKELTTNWRSDAGLIAALDHLHGGAALGHKEI
SVYPVAATRPWSRLNGPGELCTPLRVRCLTRTGAGPLNKSGFPAVGRMRAKVADDLAADI
VRLLESGTTLDTTPHRPRNSSNDAEQQRNTADADGDALPPEYRPIGPGDIAVLVRTRSQI
DVVRAALDRVGVASVLAGGTSVFATSSATDWLWVLRALEQPHRADRVRLAACTPLLGVTA
AEIDSGGADLVGRVSAQLRDAARLFARAGFAAVFEKISAEADLAHRLLAVENGERQLTDL
RHVAQLLDQVALTESLGLTALTRWLADRVRDPASGTVADRSRRLDRDAAAVQIATVHASK
GLEFPIVYLPFAWDNAKNPYPATLLFHDDNGARVLDVGGPDASGYAERKLRSEAEEAGEE
LRLLYVALTRAMCQVVAWWAPAITTAASPLHRMVLGRPDGGDMVPPRASVPADTAAPGLL
SAWAGGAGAAVSVTAVAGTEDVTIQRVRNERESGELAVARFDRTLDQNWRRTSYSALTAA
AHGPAAVAPELEPEDGREPGDEPEDAPVAALEEVFGGVPSLMNALPYGAEFGTLVHGVLE
LIDTDAPDLAAEVSERCRAVIGELMAEVDPDLLAAALLAVLRTPMDIGALAGISSRDRLN
ELEFELPLAGGDAPRAAAATLRRIADLLRAQLPADDDLAGYADQLATLDDLPLRGYLTGS
IDAVLRVADGAGTRYVIVDYKTNRLGTGDLTVEHYTRERMAAEMLRSHYPLQALLYSVAL
HRYLRWRLPGYDPARHLGGARYLFVRGMVGAETPPGHGVFDWDPPAPLIVALSELLAGDV
R
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgcaagacacctcgttcgtggtgcccgaggtcgacgggcccgacgccttcgaa
ccctacggcccgctgcccacggggacgaccgtgctggaggcgagcgccggaacgggcaag
acgcacgcgatcgtcgggctcgcggtgcggtatgtcgccgaggcggtaatcgatgtcgcc
gaactgctgctcgtgacgttcagccgggccgcgacgcaggagctgcgtgagcgaacccgg
gatcggttcgtgctggtcgcggccggtctggcggatcccgagctggcccgcgcgcacgcc
gacgacctggtccgctatctggcacaggcggacccggcggaggtgcggcgccggcgcgcc
cgcctgctcgccgcgctgtcggatttcgacgcgggcaccatcgcgaccacacacagcttc
tgccagcggatgctcgacgaactcggtctcgccggcgagcacgacccgggcgcgcggctg
gtggagtcggtcgacgaattggtcggcacggtcgccgacgacctctacctgaatcggtac
gcccgtgccgaaccgcccttcacggtgaaggagtcacacaccctggcactggccgccgta
caggatcggcacgccatgctggtgcccgccggggaatccgcggcgggggagcgggtggcg
ttcgcgaccgccgtccgggccgaaaccgaacgccgcaaacggctggcggggctgcgcgac
ttcgacgacctgctggtgctgctgcacgaggtgctcgccgatcccgaccacggtccccgg
gcctgccggcgcatccgcgcgcgctaccgggtcgcgctggtcgacgagttccaggacacc
gacccgctgcagtgggacatcctgcgcctcgccttccacggccacaccacgatggtgctc
gtcggcgacccgaagcaggcgatctacgccttccgcggcgcggaggtgctcagctacctg
gacgcggtcgcgcacgccgacacccgcaaggagctcaccaccaactggcgcagcgacgcg
gggctgatcgccgcgctggaccacctgcacggcggtgcggcgttggggcacaaggagatc
agcgtctacccggtcgccgccacccgcccgtggtcgcggctgaacggacccggcgaactg
tgcactccgctgcgggtgcggtgcctcacccgcaccggcgcgggcccgctgaacaagtcg
gggttcccggccgtcggccggatgcgcgcgaaggtcgccgacgacctggccgccgatatc
gtccggctgctcgagtccgggacgacgctggacaccaccccgcaccggccccgtaactcg
tcgaacgacgctgagcagcaacggaatacggcagacgcggacggtgacgcactgccgccg
gagtatcggccgatcggtcccggcgatatcgccgtgctggtccggacgcgctcgcagatc
gacgtcgtgcgagcggcactggaccgggtgggcgtggcctcggtgctcgccggtggcacc
agtgtgttcgcgacgagtagcgccaccgattggctctgggtgttgcgcgcactcgaacag
ccgcaccgcgccgaccgggtgcgcctcgccgcctgcaccccgctgctcggtgtcaccgcc
gccgagatcgacagcggcggagcggatctggtcggacgggtgagcgcgcaattgcgcgac
gcggcccggttgttcgcgcgcgcgggtttcgccgccgtcttcgagaagatctcggccgaa
gccgatctcgcgcatcggctgctcgcggtcgagaacggcgagcgtcagctcaccgacctg
cgccacgtggcgcagctgctcgatcaggtggcgctcaccgaatcgctcgggctcaccgcg
ctgacccgctggctggccgaccgggtgcgtgatcccgcctcgggcacggtcgccgaccgc
agtcgccggctcgaccgcgacgccgcggccgtgcagatcgccaccgtgcacgccagcaag
ggcctcgaattcccgatcgtctacttgcctttcgcctgggacaacgcgaagaacccgtat
ccggcgacgctgctcttccacgacgacaacggtgcgcgggtgctcgacgtcggcggtccc
gacgcgtccggctacgcggaacgcaagctgcgcagcgaagccgaggaggcgggcgaggaa
ctgcgcctgctctatgtcgcgctgacccgcgccatgtgccaggtcgtcgcctggtgggcg
cccgcgatcaccaccgccgcctcgccgctgcaccggatggtgctcggcaggcccgacggg
ggcgacatggtgccgccgcgcgcgtccgttcccgcggataccgctgcgccagggctgctt
tcggcctgggccgggggagcgggggcggccgtctcggtgaccgcggtggcgggtaccgag
gacgtgacgatccagcgggtgcgcaacgagcgggagagcggcgaactcgccgtcgcgcgc
ttcgaccgcaccctcgaccagaactggcgccggacttcgtattcggcgttgaccgccgcc
gcgcacggacccgccgcggtcgcgccggaactcgaacccgaggacggccgggagcccggg
gacgagccggaggacgcgccggtcgccgcgctcgaggaggtgttcggtggcgtgccctcg
ctgatgaacgcgctgccctacggcgcggagttcggcaccctggtgcacggcgtgctggag
ctgatcgatacggacgcaccggatctggccgccgaggtgagcgagcggtgccgggccgtg
atcggcgaactcatggccgaggtggaccccgacctgctcgccgcggcgctgctcgccgtg
ctgcgcacgccgatggatatcggcgcgctcgccggcatctccagccgggaccggttgaac
gaactggaattcgagttgccgctggccggcggtgacgcgccgcgcgccgccgcggcgacg
ctgcgccggatcgccgatctgctgcgcgcgcagctacctgctgacgacgacctcgccggg
tacgccgaccagttggccacgctcgacgatcttccgctgcgcggctatctcaccggcagc
atcgatgccgtgctgcgggtcgccgacggcgccggcacccgttacgtgatcgtcgactac
aagaccaaccgactgggcaccggcgatctcaccgtcgagcactacacccgcgagcggatg
gccgccgagatgctccgctcgcactacccgctgcaggcgttgctgtattcggttgccctg
caccgctatctgcggtggcggttgcccggctacgacccggcccggcacctcggtggcgcc
cgctacctgttcgttcgcggcatggtcggcgccgaaaccccgccgggtcacggcgtattc
gactgggatccgcccgcgccgctgatcgtcgcgttgtccgagctgctggccggggatgtg
cggtga
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