Nocardia brasiliensis: O3I_029935
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Entry
O3I_029935 CDS
T02270
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nbr
Nocardia brasiliensis
Pathway
nbr00300
Lysine biosynthesis
nbr00470
D-Amino acid metabolism
nbr01100
Metabolic pathways
nbr01110
Biosynthesis of secondary metabolites
nbr01120
Microbial metabolism in diverse environments
nbr01230
Biosynthesis of amino acids
Module
nbr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O3I_029935 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O3I_029935 (dapF)
Enzymes [BR:
nbr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O3I_029935 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFU03936
UniProt:
K0F8U8
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Position
complement(6812078..6812968)
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AA seq
296 aa
AA seq
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MSDFEFAKGHGTQNDFVVLPDPEVRLDLTPERVSALCDRQRGLGADGVLRVARAEALRDA
GVLADLPAGVRDTDWFMDYRNADGSIAEMCGNGTRVFAHYLVASGLETSDTFVVGSRAGG
RPVVVHSATAVDGDVTVDMGRVRELGESTATIAGWGYHGVGIDVGNPHLACVDPELTVDA
LGKLDLSVPPGYDPDLFPHGVNVEILTALDADRAVDMRVYERGVGETRSCGTGTVAAATA
ALLREGFRVGTDSGEVRVRIPGGEVTVGLVEGVATLRGPSVLLASGRIAESWWQHL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatttcgagttcgccaaagggcacggcacccagaacgatttcgtggtgctgccg
gatcccgaggttcggctggacctgaccccggagcgggtgagtgcgctgtgcgatcggcag
cgcgggctcggcgccgacggcgtgctgcgggtcgcgcgggccgaagcgctacgcgacgcg
ggcgtgctcgccgacctgcccgcgggcgtgcgcgacaccgactggttcatggactatcgc
aatgccgacggctcgatcgccgagatgtgcggcaacggcacgcgcgtgttcgcgcactat
ctggtggcctccggactggaaacgagcgacacgttcgtggtgggcagccgggccggggga
cggccggtggtggtccactccgcgaccgcggtcgacggcgacgtcaccgtcgacatgggc
cgcgtccgggaactcggcgaatccaccgccaccatcgcgggctggggttatcacggcgtc
ggcatcgacgtcggtaacccgcatctggcctgcgtcgacccggagctgaccgtggacgcc
ctgggcaagctcgacctgagcgtgccgccgggctacgacccggacctgttcccgcacggt
gtcaacgtggagatcctgaccgcgctggacgccgaccgcgccgtggacatgcgggtctac
gaacgcggcgtcggcgaaacccgttcctgcggaaccggaaccgtcgccgcggcgaccgcg
gcgctgctgcgcgagggcttccgcgtcggcaccgacagcggcgaggtgcgggtgcgcatt
ccgggcggcgaagtgaccgtcggactggtcgagggcgtcgcgacgctgcgcggaccctcg
gtgctgctcgcctccggtcgcatcgccgagagctggtggcagcacctctga
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