Nocardia brasiliensis: O3I_034635
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Entry
O3I_034635 CDS
T02270
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbr
Nocardia brasiliensis
Pathway
nbr03420
Nucleotide excision repair
nbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O3I_034635
03430 Mismatch repair
O3I_034635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_034635
Enzymes [BR:
nbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O3I_034635
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O3I_034635
MMR (mismatch excision repair)
Other MMR factors
O3I_034635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFU04876
UniProt:
K0FBN3
LinkDB
All DBs
Position
complement(7816242..7818416)
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AA seq
724 aa
AA seq
DB search
MGAVSSTSTHQPAGPALDSLDPEQAAAVRAPRGPVCVLAGAGTGKTRTITHRIAHLVSAG
HVKADQVLAVTFTARAAGELRGRLRALGLGGDANQVQARTFHAAALRQLKYFWPQVVGDV
PWRLIDGKFPIVAQAANRAGLSSATDSIRDLLSEIEWAKASLIAPEDYPAAAARQRREPP
YDALRVAEVYAGYEKLKATPEGLLLDFDDLLLHTAAALEDYPAVADEFRGRYRSFVVDEY
QDVTPLQQRVLDAWLGDRDDLTVVGDANQTIYSFTGATPSYLLDFSRRFPDATVIRLERD
YRSTPQVVSLANRVIGVARGRIAGTRLQLIGQRPDGPEPVFAEYDDGPAEASAVGKSIKR
LIDAGTPAAEIAVLYRINAQSESYEQALTELGIPYQVRGGEGFFSRPEVRQAVSVLRQAA
ARDDLPAASRSGAALVTLVRAVLAPVGLTATEPAGAQAREKWSSLVALVRLTEELVDHDD
DLDLPGLLRELAARAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLADGTMPIAHVLES
DGKVADEAALEEERRLLYVGVTRAREHLQLSWALAWGEGKRRTRRRSRFLNGLVPDDSPA
SRIAAPVTENAGKGVRPTCRVCAKPLIGTYATMLGRCRRCPAELDAELLVALQEWRAEKA
ETLRVREFVVFTDTTLTAIAEQLPGDDAALASIAGIGAKKLEQYGADVLAIIASRLRARP
QNRR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgtgtcgtcaaccagcacgcaccaacccgccggccctgcgctggattctctc
gaccccgaacaggccgccgcggtgcgggctccccggggtccggtgtgcgtgctcgcgggg
gcgggcaccggcaagaccagaaccatcacccaccgcatcgcgcacctggtgtcggccggg
cacgtgaaggccgaccaggtgctcgccgtgacgttcaccgcccgcgcggcgggcgaactc
cgcggccggctgcgggcgctcggcctgggcggagacgcgaaccaggtgcaggcgcgcacc
ttccacgcggccgcgctgcgccagctcaagtacttctggccgcaggtggtcggcgacgtg
ccatggcggctgatcgatggcaagttcccgatcgtcgcgcaggcggcgaaccgggccggg
ctgtcctcggccaccgacagcatccgtgacctgctcagcgagatcgaatgggcgaaggct
tcgctcatcgcgcccgaggactatcccgcggcggcggccagacagcggcgcgagccgccc
tacgacgcgctgcgcgtggccgaggtctacgcgggctacgagaaactcaaagccaccccc
gaaggcctgctgctcgacttcgacgacctgctgctgcacaccgcggcggcgctcgaggac
tatccggcggtggccgacgagttccgtggccgctaccgcagtttcgtggtcgacgaatac
caggacgtcaccccgctacagcagcgggtgctcgacgcctggctcggcgaccgcgacgac
ctgaccgtggtcggcgacgccaaccagacgatctattcgttcaccggcgccacaccgagc
tatctgctcgacttctcccgccgcttccccgacgccacggtgatccggctggaacgcgac
tatcgctccaccccgcaggtggtttcgctggccaaccgggtgatcggggtggcgcgcgga
cgcatcgcgggcacccggctgcagctcatcggccagcggccggacggcccggaaccggtc
ttcgccgaatacgacgacggccccgcggaggcgagcgccgtcggcaagtcgatcaagcgg
ctgatcgatgcgggcacacccgccgccgagatcgcggtgctgtatcggatcaacgctcag
tccgagagctatgagcaagcgctcaccgaactcggcatcccgtaccaggtgcgcggcggc
gaaggcttcttctcccgtcccgaggtgcgtcaggccgtctcggtgctgcgccaggccgcg
gcccgcgacgacctgcccgcggcctcgcgcagcggcgcggcgctggtcaccctggtgcgc
gcggtgctcgcgccggtcgggctcaccgcgaccgaacccgcgggcgcgcaggcacgggag
aagtggtcgtccctggtcgcgctggtccggctcaccgaggaactggtcgaccacgacgac
gacctggacctgcccggcctgctgcgggagctggcggcgcgcgccgaggccaggcaccca
ccgaccgtgcagggtgtcacgctcgcgtcgttgcacgccgcgaagggcctggagtgggac
gcggtcttcctggtcggcctcgccgacggcacgatgccgatcgcgcacgtgctggagagc
gacggcaaggtcgccgacgaggccgcgctcgaagaggagcggcgcctgctctacgtcggc
gtgaccagggcgcgggaacatctgcaactgtcctgggcgctggcgtggggcgaggggaag
cggcgcaccaggcggcgttcccggttcctgaacggcctggtacccgacgattccccggcc
tcgcggatcgccgcgccggtcaccgagaacgcgggcaaaggcgtgcgcccgacctgccgg
gtctgtgcgaagccgctcatcggcacctatgcgactatgcttggccgctgtcgtcggtgc
ccggcggaactcgatgccgagctgctggtcgctctgcaggagtggcgggcggagaaggcg
gagacattgcgggtgcgtgagttcgtggtgttcaccgacaccaccctcaccgcgatcgcc
gaacaactcccaggtgacgacgctgcgctggcctcgatcgccgggatcggcgcgaagaag
ctcgagcagtacggggcggacgtgctcgcgatcatcgcgtcgcggctgcgcgcaagaccc
caaaaccgcaggtag
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