Nocardia brasiliensis: O3I_036170
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Entry
O3I_036170 CDS
T02270
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nbr
Nocardia brasiliensis
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_036170
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O3I_036170
Archaeal homologous recombinant proteins
O3I_036170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
TMF_TATA_bd
AAA_21
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFU05181
UniProt:
K0FC95
LinkDB
All DBs
Position
complement(8147005..8150232)
Genome browser
AA seq
1075 aa
AA seq
DB search
MTAFGPFAETTVIDFDALGADGLFLLHGQTGAGKTTVLDAIAFALYGKVPGARGESKRLH
SDHAPDQTPPQVVLEVTLGGRRIRLTRIPEFERPKLRGTGMRTDPAKATLAWLDGRGENL
SRIPDIGDEIIRLLGMSADQFFQVVLLPQGDFARFLRAENEDREKLLEKLFDTERFGSAE
QWLADKRRASAADLEARKQGIDRLIAKVGVAAGAGATETVGPLEAVGWSQDLLAAARVEL
TGTAAAAERCQQESARVQARAEEQRRLHDLLRRRAAAHAQLEQYTAAADHRAAARAELEA
ARRAEPVVAAIDEARDAVMLMRAKENETAGTARRLATHLLEPGAADLGGAELIGVEDSLT
VRDDADIDAAIRRWSAQIGGLDEVRTDAAVVTGLNQELAGSRAESTALTTRIADLTKRRD
QLPGALVTLETRLREATSAAATLPTLTAECERLQAAALAAVELASRKTDLDHARVEFETA
RAAHNDAKERVLDLRERRLAGMAAELAGGLVDGTPCAVCGSADHPEPARPTADAVSKDAE
DAAVTAERAAEDARDRVHARITGLEREIEALIARGGDADRVELAAALRTATDRYEDTAEL
AALADGLTAELTRLRTDETRLHDELREADSRRSAVAANIVAADTRLAELTERLRAAAGAD
ETIERRRARLTALVTDSSALRDARAAAAAAREKVAVIADRVENLARAASFVPDEPRWNTG
DGTAQRGAVLEITDAAEAACARSAADATGDERTSDPGTTSGTSTGSEGISGAAATEPDAA
PRDHVARLTAYARVVNAASRTPQRQREIDAELAAADNARAHAQAVLAEPEIQAAATREPG
DLAELEQLVEVARTQLNAAVAAHAEANRRVSQLEELGGQLWAAVDRIAPLQRTHDELAGL
AEVVAGRGENNRRMSLRSYVLAARLEEVAQAGSVRLRRMSAGRYEFVHSDKAGPRGRRGG
LGLDIRDDYTGAVRPAKTLSGGETFMAALSLALGLADTVAAESGGLVLDTLFIDEGFGGL
DADTLDSVMGVLDELRTGGRVVGVVSHVDEMRQRIPSRLHVRRGRTGSHLEATVA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgttcggcccgttcgccgagaccacggtcatcgacttcgacgcgctcggcgcc
gacggactgttcctgctgcacgggcagaccggcgcgggaaagaccacggtgctggacgcg
atcgcgttcgcgctgtacggcaaggttccgggcgcgcgtggcgagagcaagcgcctgcac
tccgatcacgcaccggaccagacgccgccgcaggtggtgctggaggtgacgctcggcggc
cgccgcatccgcctgacccgcattcctgagttcgaacgccccaagttgcgcggtaccggg
atgcgcaccgaccccgccaaggcaaccctggcctggctggacgggcgaggcgaaaacctt
tcccggatacccgatatcggcgacgagatcatccggctgctcgggatgagcgccgatcag
ttcttccaggtggtgctgctgccgcagggcgatttcgcgcgattcctgcgggcggagaac
gaggatcgggagaagctgctcgaaaagctcttcgacaccgaacgattcggtagcgcggag
cagtggctcgcggacaagcgccgcgcctccgccgccgacctggaggcgcgtaaacaggga
atcgaccggttgatcgccaaagtcggtgtcgcggcgggggccggcgccaccgaaaccgtc
ggtccactcgaggcggtcggctggtcgcaggacctgctcgcggctgctcgcgtcgagctg
accggcactgccgcggcagccgaacgctgccaacaggagtcggcgcgggtgcaggcgcgc
gccgaggagcaacgccgactgcacgacctgctccgccgccgggcggctgcccacgcgcag
ctcgagcagtacaccgcggccgccgatcaccgtgccgcggcgcgggccgagctcgaggcc
gcccgccgcgccgagccggtcgtcgcggcgatcgatgaggccagggacgcggtcatgctg
atgcgcgccaaggagaacgaaaccgccggtacggcacgccgtttggccacgcatctgctg
gagcccggcgcggcggatctcggcggcgcggagttgatcggtgtcgaagattcgcttacc
gttcgcgacgacgccgatatcgatgccgcgatccgccgctggagcgcgcagatcggcggg
ttggacgaggtgcgcaccgacgcggcggtcgtgaccggactgaatcaggaactggcggga
tcacgagccgagagcacggcgctcaccacccggatcgcggacctgaccaagcggcgcgat
cagttgcccggcgccctcgtcacgctcgagacccggctgcgcgaagcgacgagcgcggcc
gcgacgttgcccaccctgaccgccgaatgcgaacggctgcaggccgcagctctggcggcg
gtcgaactcgcctcgcgcaaaacggatctcgatcacgccagggtcgagttcgagacggcc
cgtgccgcgcacaacgacgccaaggaacgggtcttggacctgcgtgagcgccggttggcg
ggcatggccgccgaactggccggtgggctcgtcgacggcaccccctgcgcggtatgcgga
tccgcggatcaccccgaaccggcccgccccaccgccgacgccgtgtccaaggacgccgag
gacgcggcggtgaccgccgaacgcgcggccgaggacgcccgcgatcgagtgcatgcccga
atcaccggtctggaacgcgagatcgaggcgctcatcgcccgcggcggcgacgccgaccgg
gtcgagctggctgccgccctgcgcaccgccaccgatcgctacgaggacaccgccgagctg
gccgccctcgccgacgggctgaccgccgagctcacccgcctgcgcaccgacgagacccgc
ctgcacgacgaactgcgcgaagcggattcgcggcgcagcgccgtcgccgcgaacatcgtc
gcggccgatacccgactcgcggaactcaccgagcgcctccgcgccgcggccggcgcggac
gaaaccatcgagcgccgccgcgcccgcctcaccgccctggtcaccgacagcagcgcgctg
cgcgacgcccgcgccgcggccgccgcggcccgggagaaagtggcggtcatcgccgaccgg
gtcgagaacctcgctcgcgcagcgagtttcgtgccggacgagccgcgctggaacaccggt
gacggcacagcacagcgcggtgcggtcctggagatcaccgacgccgccgaggccgcctgc
gcccgctcggccgctgacgcgacgggcgacgagcggacctctgaccctgggacaaccagc
ggcacgagcaccggtagcgaaggtatctcgggtgccgcggcgaccgagccggacgccgca
ccgcgcgatcacgtggcgcggttgaccgcgtacgcacgcgtcgtcaacgcggcgagccga
accccgcagcggcagcgggagatcgacgcggaactggccgccgccgacaacgcccgcgcc
cacgcgcaggcggtgctcgccgagccggagatccaggcggccgcgacccgggagccgggt
gatctggccgagctcgagcagctggtcgaagtcgcacggacgcaactgaatgccgctgtc
gccgcgcacgcggaggcgaatcggcgggtgagccagctggaggagctcggcggtcaactc
tgggccgcggtggaccggatcgctccgctgcagcgcacgcacgatgagctcgccgggctc
gccgaggtggtggccgggcggggcgagaacaatcgccggatgtcgctgcgctcttacgtt
ctcgccgcccggctggaagaggtggcacaggccggttcggtgcggttgcgccgaatgtcc
gcgggccgttacgaattcgtgcattcggacaaggcgggtccgcgcggccgccgcggcggg
ctcggcctggacatccgggacgactacaccggtgcggtgcgccccgccaagaccctgtcc
ggcggtgaaaccttcatggccgcactgtctttggccctgggcctggccgacacggtggcc
gccgaatccggcggcctcgtgctggacaccctgttcatcgacgagggtttcggcggcctg
gacgccgacaccctcgactcggtgatgggcgtcctcgacgaactccgcaccggcggccgc
gtcgtcggcgtcgtcagccacgtagacgaaatgcgccagcgcatccccagccgcctgcac
gtccgccgcggccgcaccggctcccacctcgaagccaccgtcgcctga
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