Nocardia brasiliensis: O3I_037705
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Entry
O3I_037705 CDS
T02270
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbr
Nocardia brasiliensis
Pathway
nbr03420
Nucleotide excision repair
nbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O3I_037705
03430 Mismatch repair
O3I_037705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_037705
Enzymes [BR:
nbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O3I_037705
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O3I_037705
MMR (mismatch excision repair)
Other MMR factors
O3I_037705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFU05488
UniProt:
K0EZU3
LinkDB
All DBs
Position
complement(8450712..8453318)
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AA seq
868 aa
AA seq
DB search
MDITVAPQTQAGRAPRPDSIHNPQVTGGNAEQARSAVEEVRAVRAPVPEPPPSVDEQEQR
RVERERRRAEEAERLLDGLNPQQRAAVVHSGAPLLIVAGAGSGKTAVLTRRIAYLLAARG
VTPGQVLAITFTNKAAAEMRERVTGLVGPRANNMWVSTFHSSCVRILRMQAALLPGMNSN
FSIYDADDSRRLLTMISRDFDIDTKKYTARLLATAISNLKNELIGPQQATADAESDETEL
PALVARVYVEYQRRLRAANALDFDDLIGETVALLQNHPQVAEYYRRRFRHVLVDEYQDTN
HAQYVLVRELVGHHRAERNEDQAPPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDAE
TILLEQNYRSTQHILSAANAVISRNENRRDKKLWTDSGEGDLITGYVADNEHDEASFVAR
EIDRLVDQGEANYSDVAVFYRTNNNSRALEEIFIRMGLPYKVVGGVRFYERKEVRDIVAY
LRVLENPDDAVSLRRILNTPRRGIGDRAEACVAVHAEQRGIGFAAALRDAADGKVALLNT
RAQRAIAGFLDLLEEIRAAGVQEDLDFPDVGNVVDAVLERTGYRGELEASDDPQDGARLD
NLNELVSVAREFSSEAPNNAEAAREEGLLPEVAEGEPDPGSLAAFLERVSLVADTDQIPD
EGTGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPTELAEERRLAYVGITRARK
RLYLSRAVVRSGWGQPVSNPESRFLQEIPGHLIDWRRLEPAGSPASRGIRRRGDSDGMER
DWTRGDGWSERPGVRPDRGPRRPAPGAVGKNNANLVLAVGDRVSDDKYGLGKVVAAEGFG
PLATVTIDFGTAGKIRLIPQYSRTLVKL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacatcacggtggctccccagacgcaggccggtcgcgccccacggccggattcgatc
cataacccgcaggtcaccggtggtaacgccgagcaagcgcggtcggctgtcgaggaggtg
cgtgcggtgcgagcgccggttccggaaccgccgccgtcggtcgacgagcaggagcaacgg
cgtgtcgaacgggagcgtcggcgcgccgaagaagccgagcgcctgctcgacgggctcaat
ccgcagcagcgcgccgcggttgtgcacagtggcgccccgctgctgatcgtggccggtgcc
gggtcgggcaagaccgccgtgctcacccgccgcatcgcctacctgctcgccgcgcgcggc
gtgacgcccggccaggtgctcgcgatcacgttcaccaacaaggctgctgccgagatgcgg
gagcgggtgaccggactggtcggtccgcgggcgaacaacatgtgggtatcgacgttccac
tccagttgtgtccgaatattgcgcatgcaagccgccctgttgccgggcatgaattcgaat
ttctccatctacgatgccgatgattcgcggcgactgctcaccatgatcagtcgtgacttc
gatatcgacacgaagaaatacacggcacgactgctggccaccgcgatctcgaatctcaag
aacgagctcatcgggccacagcaggccaccgcggacgcagagtcggacgaaaccgaacta
cccgccctggtcgcgcgggtctacgtcgagtaccagcggcggctgcgcgcggccaacgca
ctcgacttcgacgacctgatcggcgagacggtggccctgctgcagaaccacccgcaggtg
gccgagtactaccggcgccgcttccggcatgtgctggtcgacgaataccaggacaccaac
cacgcgcaatacgtgctggtgcgcgaactcgtcggacatcaccgggccgagcgcaacgag
gatcaggcgccgccgagtgaactgtgcgtggtgggtgacgcggaccagtcgatctacgcg
ttccgcggcgccaccatccgcaacatcgaagagttcgagcgcgacttccccgacgcggaa
accattctgctggaacagaactaccggtccacccagcacattctctccgcggccaacgcg
gtgatctcgcgcaacgagaaccggcgcgacaagaaactgtggaccgactccggcgaaggc
gacctgatcaccggctacgtcgccgacaacgaacacgacgaggcgtcgttcgtggcgcgg
gagatcgatcggctggtcgatcagggcgaagccaactactccgacgtcgcggtgttctac
cggaccaacaacaactcccgggcgctggaagagatcttcatccggatgggcctgccgtac
aaggtggtcggcggcgtccggttctacgagcgcaaggaggtccgcgacatcgtcgcgtat
ctgcgggtgctggagaaccccgacgatgcggtgagcctgcgccggatcctcaacacgcca
cgtcgcggtatcggcgaccgggccgaagcctgcgtcgccgtgcacgccgaacagcgtggc
atcgggttcgccgcggcgctgcgggacgcggcggacggcaaagtggcgctgctgaacacc
agggcccagcgcgcgatcgccggcttcctcgacctgctcgaggagatccgggccgcgggc
gtgcaggaggacctggatttccccgacgtcgggaacgtggtcgacgcggtgctggagcgc
accggctaccgcggcgaactggaggcctccgacgatccgcaggacggcgcccggctggac
aatctcaacgaactcgtcagcgtcgcacgggaattcagctccgaagcacccaacaacgcg
gaggcggcccgggaagagggactgctgcccgaggtcgccgagggcgaacccgaccccgga
tcgctcgccgcgttcctcgaacgggtctcgctggtcgccgacaccgaccagatcccggac
gaaggcaccggcgtggtcaccatgatgacgctgcacacggccaagggcctggagttcccc
gtggtgttcgtgaccggttgggaagacggccagttcccgcacatgcgggcactcggcgac
ccgaccgaactggccgaggaacgccgcctcgcctacgtcggcatcacccgggccaggaag
cggctgtacctgagtcgcgcggtcgtgcgctccggttggggacaaccggtgtccaacccg
gaatcccgctttctccaagagattccgggccacctgatcgattggcggcgactggagccc
gccggatccccggcgagccggggcatccgcaggcgcggcgacagcgacggcatggaacgc
gactggacccgcggcgacggctggtccgaacgccccggcgtgcgtcccgatcggggtccg
cgtcgtccggcgcccggtgccgtcggcaagaacaacgcgaatctggtactcgccgtgggc
gatcgggtcagcgacgacaagtacggcctcggcaaggtggtcgccgccgagggcttcggc
ccgttggcgaccgtcaccatcgacttcggcaccgccggcaagatccggctcatcccgcaa
tacagcaggacgctcgtcaaactctga
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