Nocardia brasiliensis: O3I_037790
Help
Entry
O3I_037790 CDS
T02270
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nbr
Nocardia brasiliensis
Pathway
nbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O3I_037790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbr03400
]
O3I_037790
Enzymes [BR:
nbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
O3I_037790
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
O3I_037790
DNA repair and recombination proteins [BR:
nbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O3I_037790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
AFU05505
UniProt:
K0F7Z9
LinkDB
All DBs
Position
complement(8472102..8472971)
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVEALAQFLREHAVGAVVGRVDVAALSAVKTFDPPVTALSGRDVTGAGRWGKFLG
MDCGGLWLITHLSRGGWLRWIDEPSQTPPKPGGKSPLALRVHFFTPEGATPAIDLTEAGT
KKRLAVYIVDDPKLVPGIARLGPDALAVTEEEFAEILCGASQRIKTAIVDQTLLAGIGNA
YSDEILHTARISPFANTKTLAADKVSELYAAMRAVLSDAVQRSVGQDAARLKGEKRSGMQ
VHARTGLPCPVCGDTVREVSYAERSFQYCPTCQTGGKILADRRMSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactacctgaagtggaggcgttggcgcagttcctccgggaacatgcggtcggc
gccgtggtggggcgtgtggatgtcgcggcgttgagcgccgtgaagaccttcgatccgccg
gtgaccgcgctgtccggccgggatgtgacgggcgcgggtcgctggggcaaattcctcggc
atggactgcggcggcctgtggctgatcacgcatctgtcccggggcggctggttgcgctgg
atcgatgagccgagccagacgccgccgaagccgggcggcaagagtccgttggcgttgcgc
gtgcacttcttcacccccgagggcgcgacgcccgcgatcgatctgaccgaggccggcacc
aagaagcggctcgcggtgtacatcgtggacgacccgaagctggtccccggcatcgccagg
ctcgggcccgacgcgctcgcggtgaccgaggaggagttcgccgagatcctgtgcggcgcc
tcgcagcggatcaagaccgcgatcgtcgaccagaccctgctggcgggcatcggcaatgcc
tactccgacgagatactgcacaccgcacggatatcgccgttcgccaacaccaaaaccctt
gcagcggacaaggtctccgagttgtacgcggcgatgcgggcggtgctgtccgacgccgtg
caacggtcggtcggccaggacgccgcccggctcaaaggcgagaaacgctccggcatgcag
gtgcacgcgcggaccggtctgccgtgcccggtctgcggcgacaccgtccgtgaggtctcc
tacgcggagcgttccttccagtactgcccgacctgtcagaccggcggcaagatcttggcc
gaccgccggatgtcgcgcctgctcaagtag
DBGET
integrated database retrieval system
