Nocardioidaceae bacterium TYQ2: KLP28_00260
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Entry
KLP28_00260 CDS
T08881
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KLP28_00260 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nbt01007
]
KLP28_00260 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbt03016
]
KLP28_00260 (aspS)
03029 Mitochondrial biogenesis [BR:
nbt03029
]
KLP28_00260 (aspS)
Enzymes [BR:
nbt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KLP28_00260 (aspS)
Amino acid related enzymes [BR:
nbt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KLP28_00260 (aspS)
Transfer RNA biogenesis [BR:
nbt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KLP28_00260 (aspS)
Prokaryotic type
Other AARSs
KLP28_00260 (aspS)
Mitochondrial biogenesis [BR:
nbt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KLP28_00260 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QWC85269
LinkDB
All DBs
Position
complement(53778..55589)
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AA seq
603 aa
AA seq
DB search
MIRTHDAGALRADHVGQTVTLAGWVARRRDHGGVAFIDLREASGVVQVVVRDEEVANRLR
NEFCLKVVGEVSARPEGNANDAIPTGEIEVIATEVEVLSTAAPLPFPIDEHVEVGEETRL
AHRYLDLRRPAPAAAIRLRSRVNAAARRVLGDADFVEVETPTLTRSTPEGARDFLVPARL
RPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQPEFTQLDIEMSFVEQD
DVIELAERLLREVWALIDVEVPTPLPRMTYAEAMRRYGSDKPDLRCPIELVECTDYFADT
PFRVFQAEYVGAVVMPGGADQPRRQLDAWQEWAKQRGARGLAYVLVGEDGTLGGPVAKNL
SDAEREGLAAHVGAQPGDCVFFGAGATKSSRALLGAARMEIGRRVGLVDEDAWSFLWVVD
APMFEPAGDAVAAGDVAVGDGAWTAVHHAFTSPKEEFTDTFDTDPGSALAYAYDVVCNGN
EIGGGSIRIHRQDVQERVFGVMGLDEAEAAEKFGFLLEAFKYGAPPHGGIAFGWDRICAL
LSGTDSIREVIAFPKTGGGYDPLTAAPAPITAAQRKEAGVDAKPATPTGEPSETAPAAAP
PVS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcacccacgacgccggcgccctgcgcgccgaccacgtcggccagaccgtcacc
ctcgccggatgggtcgcgcgccgccgcgaccacggcggcgtggccttcatcgacctgcgc
gaggcctccggcgtggtgcaggtcgtggtgcgcgacgaggaggtggccaaccggctccgc
aacgagttctgcctcaaggtcgtcggtgaggtctccgcacgccccgagggcaacgccaac
gacgccatcccgacaggggagatcgaggtgatcgccaccgaggtggaggtgctctcgacc
gccgcgccgctgcccttccccatcgacgagcacgtcgaggtcggcgaggagacgcgcctg
gcgcaccgctacctggacctgcgacgccccgctccggctgcggcgatccggctgcgttcg
cgggtcaacgccgccgcgcgccgcgtgctcggcgacgccgacttcgtcgaggtcgagacc
cccaccctgacgcgctcgacgcccgagggcgcccgcgacttcctggtgcccgcgcggctg
cgccccggcagctggtacgccctgccgcagagcccccagctgttcaagcagctgctgatg
gtcggtgggctcgagcggtactaccagatcgcgcgctgctaccgcgacgaggacttccgc
gccgaccggcaacccgagttcacccagctcgacatcgagatgagcttcgtggagcaggac
gacgtcatcgagctggccgagcggctgctccgcgaggtctgggcgctcatcgacgtcgag
gtgccgaccccgctgcctcgcatgacgtacgccgaggcgatgcgccgctacggctcggac
aagcccgacctgcggtgcccgatcgagctcgtggagtgcaccgactacttcgccgacacc
ccgttccgggtgttccaggccgagtacgtcggcgccgtcgtcatgcccgggggagccgac
cagccccgccgccagctggacgcctggcaggagtgggccaagcagcgcggcgcccgcggc
ctggcgtacgtgctcgtcggcgaggacggcacgctcggtggcccggtcgccaagaacctc
tcggacgccgagcgcgagggcctcgcagcccacgtcggcgcgcagccgggcgactgcgtg
ttcttcggggcgggtgccacgaagtcctcccgggcgctcctgggtgccgcgcgcatggag
atcggtcgccgggtcggtctcgtcgacgaggacgcctggagcttcctgtgggtggtggac
gcgccgatgttcgagcctgcaggtgacgcggtcgccgcgggtgacgtggcggtcggcgac
ggcgcctggacggccgtgcaccacgccttcacctcgccgaaggaggagttcacggacacc
ttcgacaccgaccccggctcggcgctggcgtacgcctacgacgtggtctgcaacgggaac
gagatcggtggcgggtcgatccgtatccaccgccaggacgtgcaggagcgcgtcttcggc
gtgatgggtctcgacgaggcggaggcggccgagaagttcgggttcctgctcgaggccttc
aagtacggcgccccgccgcacggcgggatcgcgttcgggtgggaccggatctgtgccctg
ctgagcggcacggactcgatccgcgaggtcatcgccttccccaagaccggtgggggctac
gacccgctcaccgcagcgcccgcgccgatcacggccgcgcagcgcaaggaggcgggcgtg
gacgcgaagccggccacgccgacgggagagccgagcgagaccgcgcccgcggccgctccc
cccgtgtcctga
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