Nocardioidaceae bacterium TYQ2: KLP28_01190
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Entry
KLP28_01190 CDS
T08881
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KLP28_01190 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_01190 (mutM)
Enzymes [BR:
nbt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KLP28_01190 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KLP28_01190 (mutM)
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KLP28_01190 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
FlhC
Motif
Other DBs
NCBI-ProteinID:
QWC85429
UniProt:
A0A975MH22
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All DBs
Position
complement(246613..247491)
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AA seq
292 aa
AA seq
DB search
MPELPEVEVVRRGLEAHVVGRTVTDVEVLHPRPVRRHLAGPEDFARSLRGLTIVAARRRG
KFLWLPLDSGDALLAHLGMSGQMLVQPPTAPDERHLRVRFGLVDATGAPAGYELRFVDQR
MFGGVSLSHGGADLPAEARHIARDPLDPLFDDDAFARTVRRRTSAIKRLLLDQTVVSGVG
NIYADEALWAVAVHGERRGEQLTRRQVLDLLEAVRAVMRSALDQGGTSFDALYVNVNGES
GYFDRSLHAYGQEGLPCERCGTPIVRTTFTNRSSFWCPACQPKPRARRRPSR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgaggtcgtccgccgcggtctggaggcccacgtcgtcggg
cgtaccgtgaccgacgtcgaggtgctgcaccccaggccggtgcgccgtcacctcgccggt
ccggaggacttcgcccggtcgttgcgggggctcaccatcgtcgccgcgcggcggcgtggc
aagttcctgtggttgcccctggactccggcgacgccctgctggctcacctcggcatgagc
ggtcagatgctcgtgcagcccccgacggcccccgacgaacggcacctgcgcgtgaggttc
ggcctggtcgacgcgaccggggccccggcggggtacgagctgaggttcgtcgaccagcgc
atgttcgggggagtgtcgctctcccacggcggggcggacctgcccgccgaggcgcgtcac
atcgcccgggacccgctcgaccccttgttcgacgacgacgcgttcgcacgcacggtgcga
cgccgcaccagcgccatcaagcgtctgctgctggaccagacggtggtctccggggtgggc
aacatctacgccgacgaggcgctgtgggccgtcgccgtccacggcgagcggcgtggcgag
cagctgacccgacgtcaggtgctcgacctcctcgaggccgtccgtgcggtgatgcgctcc
gcgctggaccagggcggcacctccttcgacgcgctgtacgtcaacgtcaacggcgagtcc
ggctacttcgaccgctctctccacgcgtacggccaggaggggctgccgtgcgagcggtgc
ggcaccccgatcgtccgcacgaccttcaccaaccgctcgtccttctggtgccccgcgtgc
cagccgaagccgcgggcccgccggcgtccctcccgctga
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