Nocardioidaceae bacterium TYQ2: KLP28_01300
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Entry
KLP28_01300 CDS
T08881
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KLP28_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nbt03000
]
KLP28_01300
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_01300
Enzymes [BR:
nbt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KLP28_01300
Transcription factors [BR:
nbt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KLP28_01300
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KLP28_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF7437
Motif
Other DBs
NCBI-ProteinID:
QWC85451
UniProt:
A0A975R620
LinkDB
All DBs
Position
complement(269010..271172)
Genome browser
AA seq
720 aa
AA seq
DB search
MGDLAEQPGQHGDALAVEVVGQPVHGGREEARIAEDHLVDSLGRGVAGRRLLGVEQQRAA
DVGQGVQHPRHEVTRLVVQTRQRQGLLEQVDEHTDVGVDLTRPAARVPGVVGEQQREVGV
EHAFGHVRQLRGQRVRRAIGADALHQVVGEPQCRRGLVTGVGSGVVHGCDGTPSPSCPPS
PRPCRVRFPPAALAWRRQDGRVSTEAGTSEDPRYRAVLGRDARFDGVFWTGVHSTGIYCR
PSCPARTPRPDGVSFHPTAAAAQEAGFRACRRCRPDAVPGSPAWDVAGDVAGRAVRLVND
GVVDRDGVEGLAERLGYSSRHLGRVLTERLGAGPLQLARARRAHTARLLLETTDLPVTDV
AYAAGFGSVRQFNETVRAAYDATPGELRARRPRGAGGEVTGDVPELRLDLPVRLPFAAHE
LWVFLAAHLVEDVEDAGPGWYARTLRLPQGPGLVRLELDDADRTGRVSCRLRLSDLRDLG
PALERVRRILDADADPVRIDADLGGDPLLAPLVAAAPGRRLPGSPDGDEAAVRTVLGQQV
SMAGAITLAGRLTAAYGEPGLPTPDGPDRLFPSAAALAAADPESFPMVKARARALVGLCE
ALAAGEVALDRSRPREEVRESLLALRGIGPWTADYVAMRALGDPDVFLPGDLAVKKVLAS
LGEDPAAAARRVETWRPWRSYAVMQLWGTLDLAPASHATAARPTTAARPTTARPRPQENP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatctcgccgagcagccggggcagcacggggacgccctcgccgtagaggtggtg
ggccaaccggtgcacggcggtcgcgaagaagcccggatagctgaggatcacctcgtcgac
tccctcggccgcggggtcgccggccgccgtctgctcggcgtcgagcagcagcgcgctgcg
gatgtcgggcagggcgtccagcacccccgccacgaggtcacgcggctcgtggtccagacc
cggcagcgccagggcctcctcgagcaggtcgacgagcacacggacgtcggcgtcgacctc
acccgcccggcagcccgcgtcccgggtgtagtgggggaacagcagcgcgaggtaggcgtg
gagcacgcgttcggccacgtccggcagctgcgtgggcagcgcgtacgccgcgcgatcggc
gcagatgcgctgcaccaggtcgtcggagagccgcagtgtcgccgcggccttgtcaccgga
gtcggaagcggagtcgttcacggctgcgacggtacgccgagcccgtcatgccccccgagc
ccccgaccctgccgcgtccgattcccgccagccgctctggcgtggagacgtcaggatggt
cgcgtgagcaccgaggcaggcacgagcgaggacccgcgctaccgcgccgtcctcggtcgt
gacgcccgcttcgacggcgtcttctggaccggggtgcactccaccggcatctactgccga
ccctcgtgcccggctcgcacgccgcgtcccgacggcgtgagcttccaccccaccgcggcc
gccgcgcaggaggccggcttccgcgcctgccgccggtgccgaccggacgccgtcccgggg
tctcccgcgtgggacgtggcgggggacgtggcggggcgggccgtacgcctcgtcaacgac
ggcgtggtcgaccgcgacggcgtcgaaggcctggccgagcggctcggctactcgagcaga
catctcggccgggtgctgaccgagcggctaggagcaggccccctgcaactcgcgcgggcc
cgtcgcgcgcacacggcccggctgctgctcgagaccaccgacctgccggtcacggacgtg
gcgtacgcggccgggttcggaagtgtccggcagttcaacgagaccgtgcgggcggcgtac
gacgccacccccggtgagctgcgagcgcgacggccgcgaggagcgggcggcgaggtcacg
ggcgacgtgcccgagctgcgtctcgatctcccggtgcggctgccgttcgccgcgcacgag
ctgtgggtcttcctcgcggcccacctggtcgaggacgtcgaggacgccggacccggctgg
tacgcgcgcaccctgcgtctgccccagggtccgggcctggtgcggctcgagctcgacgac
gccgatcgcacggggcgggtgtcgtgccggctgcggctgagcgacctgcgcgacctcgga
ccggcgctggagcgcgtacgccgcatcctggacgccgacgccgaccccgtccgcatcgac
gccgatctcggcggtgacccgctgctcgcaccgctcgtcgcggcggccccgggccgccgg
ctgcccggcagccccgacggcgacgaggcggccgtccgcacggtgctcggccagcaggtc
tccatggccggcgcgatcacgctggcgggacggctcaccgcggcgtacggcgaacccgga
ctgcccacgccggacggacccgaccggctcttcccctcagcggccgcgctcgccgccgcg
gacccggagagcttccccatggtcaaggcccgggcccgggcgctcgtaggcctgtgcgag
gccctcgcggcgggcgaggtcgccctcgaccgcagccgaccccgcgaggaggtgcgcgag
agcctcctcgcgctgcggggcatcgggccctggacggccgactacgtcgcgatgcgagca
ctcggtgacccggacgtgttcctgccgggcgacctcgcggtcaagaaggtgctggcgtcc
ctcggtgaggacccggcggccgccgcgcgacgggtcgagacctggcggccgtggcgctcg
tacgccgtgatgcagctgtggggcaccctcgacctcgcgcccgcctcccacgccactgct
gcccgtccgaccactgccgcccgcccgaccaccgcccggccccgaccccaggagaacccg
tga
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