Nocardioidaceae bacterium TYQ2: KLP28_03435
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Entry
KLP28_03435 CDS
T08881
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KLP28_03435 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_03435 (recO)
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KLP28_03435 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KLP28_03435 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QWC85815
LinkDB
All DBs
Position
complement(728169..728900)
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AA seq
243 aa
AA seq
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MPLYRDEAVVLRTHKLGEADRILTLLTRRSGRVRAVARGIRRTTSKFGARLEPFSHVDLQ
LAEGRTLDVVTQAVTLTPFALRLGGDYERYTAGTVMLETAGRVVPEEGEPATAQHQLLVG
ALRALTGGERTATEVLDSYLLRALATAGFAPSFEACARCGELGDHRAFSAMAGGILCTGC
RVPGAAHPQPETVRLLGALLTGDWDTAAGADARHRREASGLVAAYVSWHLERGLTSLAHL
DRG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctctaccgcgacgaggccgtcgtcctgcgtacgcacaagctgggtgaggccgac
cggatcctcaccctgctcacgcgacgcagcggtcgtgtccgcgccgtggcccgcggcatc
cggcgcaccacctcgaagttcggtgcgcgtctcgagcccttcagccacgtcgacctgcag
ctcgccgagggccgcacgctggacgtggtcacccaggcggtcaccctgaccccgttcgcc
ctgcgcctcggcggtgactacgagcggtacaccgccggcacggtgatgctcgagaccgcg
ggccgcgtcgtgcccgaggagggcgagcccgccacggcacagcaccagctgctcgtcggc
gccctccgtgccctgaccggcggggagcgtacggccaccgaggtgctcgactcctacctg
ctgcgcgcgctggcgaccgccggcttcgcgcccagcttcgaggcctgcgcacggtgcggc
gagctcggcgaccaccgcgcgttctcagcgatggccggcgggatcctgtgcaccggctgc
cgggtgcccggggccgcgcacccgcagccggagaccgtacgcctcctcggcgcgctgctc
accggcgactgggacaccgccgcgggtgccgacgcgcgccatcgccgtgaggcgtccggc
ctcgtcgccgcgtacgtctcctggcacctcgaacgcggcctcacctccctggcccacctc
gaccgcggctag
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integrated database retrieval system
