Nocardioidaceae bacterium TYQ2: KLP28_03655
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Entry
KLP28_03655 CDS
T08881
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03030
DNA replication
nbt03430
Mismatch repair
nbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KLP28_03655 (holA)
03430 Mismatch repair
KLP28_03655 (holA)
03440 Homologous recombination
KLP28_03655 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbt03032
]
KLP28_03655 (holA)
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_03655 (holA)
Enzymes [BR:
nbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KLP28_03655 (holA)
DNA replication proteins [BR:
nbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KLP28_03655 (holA)
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KLP28_03655 (holA)
BRITE hierarchy
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QWC85851
UniProt:
A0A975MIF5
LinkDB
All DBs
Position
complement(776182..777255)
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AA seq
357 aa
AA seq
DB search
MSEPRGSGRGRSRTPRRPLSEHCARLLSVAGTRAPSAADVLGTVTLLTGPEEFLGERAVT
TLKEVVRGVDPEAEFSDTVGSSVTAAALDELSAPSLFSSTRCVVVRLLEDLPEEAVPGVV
DYAAAPAEDVALILVHTGGQKGTGILTRLRKLDTVRESKSAAVKAHELPGFVAGEVRRHG
GRIETPAAEALVQAVGTDLRALAGAADQLAHDFADRSISADLVARYFGGRAETKSFAVAD
AAVLGRAAVALEELRWALDTGTPPVLVTSALAGSLRALGRLQGVRRGARDADIARELGVP
PWKVRQITGQARAWDAAGIATALRAVARADAEVKGAAHDPAYALERMLLDVTEARLG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagccacgagggagcggccgggggaggagtcgtacgccccgacgcccgctgtcg
gagcactgtgcgaggctgttgagcgtggcaggcaccagggctccgagcgccgcggacgtg
ctcggcaccgtgacgctgctgaccggccccgaggagttcctcggcgagcgggccgtcacc
acgctcaaggaggtcgtgcgcggcgtcgaccccgaggcggagttctccgacaccgtcggc
tcctcggtcacggccgccgccctcgacgagctgtcggcaccctcgctcttctcctccacc
cgctgcgtggtcgtcaggctgctcgaggacctgcccgaggaggccgtccccggcgtcgtc
gactacgccgccgcgcccgccgaggacgtcgccctgatcctcgtgcacaccggcgggcag
aagggcaccggcatcctgacccgcctgcgcaagctcgacacggtgcgggagtccaagtca
gccgcggtcaaggcgcacgagctgcccggtttcgtcgcgggcgaggtgcgacgccacggt
ggacgcatcgagacccccgccgccgaggcgctggtgcaggcggtcggcaccgacctgcgc
gcgctcgccggcgccgccgaccagctcgcccacgacttcgcggaccgctcgatctcagcc
gatctcgtcgcccgctacttcgggggccgcgcggagaccaagtccttcgccgtcgccgac
gccgccgtgctcggccgcgccgccgtggccctcgaggagctgcgatgggcgttggacacc
ggcacaccgccggtgctggtcaccagcgcgctcgccggctcgctccgcgcgctgggacgg
ctccagggcgtacgccgcggcgcgcgcgacgccgacatcgcccgcgagctgggggtgcca
ccgtggaaggtccgccagatcaccggtcaggcgcgggcctgggacgccgccggcatcgcg
accgcgctgcgggccgtcgcccgggccgacgccgaggtcaagggggcggcgcacgacccc
gcgtacgcgctggagcgcatgctcctcgacgtcaccgaggcgcgcctcggctga
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