Nocardioidaceae bacterium TYQ2: KLP28_03790
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Entry
KLP28_03790 CDS
T08881
Name
(GenBank) Rne/Rng family ribonuclease
Organism
nbt
Nocardioidaceae bacterium TYQ2
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
DUF5351
Motif
Other DBs
NCBI-ProteinID:
QWC85876
UniProt:
A0A975MI04
LinkDB
All DBs
Position
complement(806067..809681)
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AA seq
1204 aa
AA seq
DB search
MLEDQQNEAGNDEGAAGPGGSGESAPAVKKTTRRRRTTKAAAPEPPALPETAVEEPATEA
TAAPADSSVPDAAPEAPEATDEAPATTTRTTTRRRAARKSAAPAPASVLSAGDDAGDDAG
GREDGEESTEPVTTAASSAVGTTTTSSRTRGSGGSRRRTSAAAESNPSSGSAGIEGAEQP
VEAAAEAEEAATTEAAALVAEDAETPETTETPEATEERPAEQPTAVTTTRTTTRTRRSRG
ASSTGVVFQAPDTAQATTAAAAGVSAPSAGGEAGPAEVEEADEVDESAGSGTREVAQTGA
DQAEDSKDSKDSKDSKDSTDTGDTTETDDDSDEDKPARRRRRRGGRRRRRGRGGSSGSSG
EGGEGGDTDDESAGSGDDGSARDESSRTSERSDADGETPGEDTGSKSGNKSSGKSGNKSG
GRTSGKGADETAAGTSDTDTPTDAANDSTNDSTSDGDDGDDDKQRSGSGSGSRRRRRRRR
SGDSGSSGDGSSDDPENTVTRVRKGRSPEDEITSLSGSTRLEAKKQRRREGREAGRRKAP
IVSEAEFLARRESVDRTMVVRQGEDLTQIAVLEDKVLVEHYVARKSQTSMIGNVYLGKVQ
NVLPSMEAAFIDIGKGRNAVLYAGEVNWQAVGAKEGQPRKIEQVLKSGQSVLVQVSKDPV
GQKGARLTGQISLPGRFLVYVPDGTTSGISRKLPDTERARLKSLLKQIVPSSAGVIVRTA
AEGASEDELTRDVERLKTQWESIEKKVAKGTAPQLLHGEPDLTLKVVRDVFTEDFGTLVV
SGDEAWETVHDYVSTMAPDLVERLEHHQDADADVFARHRIDEQLAKALDHKVWLPSGGSL
IIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEELVRQLRLRDIGGIIVVDFIDM
VLQNNRDLVLRRLIECLGRDRTRHQVAEVTSLGLVQMTRKRIGTGLLEAFSETCPHCKGR
GHTVAAEPVEPAPAADDQRRGRGRASKSRGSGGSDGSGGSPQGGSGGSTQKGEDPAPARQ
GPDPAMLAAMARHDKPAETPNGASTTEDGFGETPAVDPVTEKGTEPEPVADAPQAETSDP
APEQVPTAKRTRSSSTRRTGARKAAAAPSPAQQPESAGEPTVAAGAAEATSPDATSATSA
TSAAPTTTTSTTRRGSRRRAASSTAQAETTAPSVAPHETASTGDPEAPQPAEPADRDGDP
AQDA
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggaccagcagaacgaagccggcaacgacgaaggggccgccggtccgggcggg
agtggcgagtccgcccccgccgtcaagaagacgacccgacggcggcgtacgacgaaggcc
gccgcgccggagccccccgcgctgccggagacggccgtcgaggagcccgccaccgaggcc
accgccgccccggcggactcctcggtgccggacgcggcccccgaggcgcccgaggccacc
gacgaggctccggccacgaccacccgtacgacgacccgccgccgtgccgcccgcaagtcc
gccgcacctgctccggcctcggtcctgagcgccggggacgacgccggggacgacgccggg
ggccgcgaggacggcgaggagtccaccgagccggtcaccaccgccgccagctccgcggtc
ggtaccacgacgacctcatcgcgtacgcggggcagcggtggcagccgccgccgcacctcg
gcggccgccgagtccaacccgtccagcgggtccgccggcatcgagggggccgagcagccg
gtcgaagccgccgccgaggccgaggaggcagcgaccacggaggccgccgccctcgtggcg
gaggacgccgagacgccggagaccaccgagacgccggaagccaccgaggagcgaccggcc
gagcagcccacggccgtgacgacgacgcgtacgaccacgcgcacccgtcggtcgcgagga
gcctcgtccacgggcgtcgtcttccaggcgcccgacacggcccaggcgacgaccgcagcc
gcggccggtgtgtctgctccgtcggctggtggcgaagccggccccgccgaagtcgaggag
gccgacgaggtcgacgagagcgctgggtccgggacccgcgaggtcgcgcagaccggggcg
gaccaggccgaggactccaaggactccaaggactccaaggactccaaggactcgacggac
acgggcgacacgactgagaccgacgacgactccgacgaggacaagccggctcgccgtcgc
cgtcgccgcggcggccgtcgtcggcgccgtggtcgcggcggctcgagcggctcgagcggc
gagggcggcgagggcggcgacacggacgacgagtccgccggatccggtgacgacggctcc
gcccgggacgagtcgtcccgcacgtccgagcggtccgacgccgacggcgagaccccgggc
gaggacaccggcagcaagtccggcaacaagtcgagtggcaagtcgggcaacaagtcgggt
ggcaggacgagtggcaagggcgcggacgagaccgccgcgggtacgagcgacacggacacc
ccgaccgacgcagcgaacgactccacgaacgactccacgagcgacggggacgacggggac
gacgacaagcagcgttccggttcgggttccggatcgcgccgtcgtcggcgccgtcgccgc
tcgggggactcgggctcgtcgggcgacgggtcctccgacgacccggagaacaccgtcacg
cgcgtccgcaagggccgctcgcccgaggacgagatcacctcgctgtcgggctcgacacgg
ctcgaggcgaagaagcagcgccgccgtgagggccgcgaggcggggcggcgcaaggcgccg
atcgtgtccgaggccgagttcctggcacggcgcgagtccgtcgaccgcacgatggtcgta
cgccagggcgaggacctcacccagatcgcggtgctcgaggacaaggtgctcgtggagcac
tacgtcgcgcgcaagtcgcagacctcgatgatcggcaacgtctacctcggcaaggtgcag
aacgtgctgccctccatggaggccgcgttcatcgacatcggcaagggccgcaacgccgtc
ctgtacgccggcgaggtcaactggcaggccgtgggcgcgaaggagggccagccccgcaag
atcgagcaggtgctgaagtccggccagtccgtgctggtgcaggtctccaaggatcccgtc
ggccagaagggcgcccggctgaccgggcagatcagcctgcccggccggttcctggtgtac
gtgcccgacggcaccacctcgggcatctcgcgcaagctgcccgacaccgagcgtgcccga
ctgaagtcactgctcaagcagatcgtgcccagcagcgccggggtgatcgtgcgtaccgcc
gccgagggtgccagcgaggacgagctgacccgcgacgtcgagcgtctgaagacgcagtgg
gagtccatcgagaagaaggtggcgaagggcaccgccccgcagctgctccacggcgagccc
gacctgacgctgaaggtcgtccgcgacgtcttcaccgaggacttcggcacgctggtcgtg
tccggggacgaggcctgggagacggtgcacgactacgtctccaccatggctcccgacctc
gtcgagcgtctcgagcaccaccaggacgccgacgccgacgtcttcgctcggcaccgcatc
gacgagcagctcgcgaaggcgctggaccacaaggtctggctgccctcgggcgggtcgctg
atcatcgaccgcaccgaggcgatgaccgtggtggacgtcaacaccggcaagttcaccgga
tcgggcggcaacctggaggagacggtcaccaagaacaacctcgaggcggccgaggagctc
gtccgtcagctgcgactgcgtgacatcggcggcatcatcgtcgtggacttcatcgacatg
gtgctgcagaacaaccgcgacctggtgctgcgccgtctcatcgagtgcctcggccgggac
cgtacgcgtcaccaggtcgccgaggtgacctccctcggactcgtccagatgacccgcaag
cgcatcggcacaggcctgctcgaggccttcagcgagacctgtccgcactgcaagggtcgc
ggccacaccgtcgccgccgagcccgtcgagcccgcccccgcggcggacgaccagcgacgc
ggccgtggacgcgcgtccaagagccgcggctccggagggagcgacggctcgggtggctcg
ccacagggcggctcgggtggctcgacgcagaagggggaggaccccgcccccgcgcgtcag
gggcccgacccggcgatgctcgcggcgatggcgcgccacgacaagcccgctgagacgccg
aacggggcgtcgacgacggaggacggcttcggtgagacccccgccgtggacccggtcacc
gagaaggggaccgagcccgagccggtcgcggacgcgcctcaggccgagacgtcggacccc
gcgcccgagcaggtgccgaccgccaagcgcacccgctcgagcagcacgcggcgtacgggg
gcgcgcaaggccgcggctgcgccgtcgccggcgcagcagcccgagtccgccggcgagccg
acggtggccgccggcgccgcggaggcgacgagccccgacgccacgagcgccacgagcgcc
acgagcgccgccccgaccacgaccacgtcgacgacccggcgcgggagtcggcgtcgtgcg
gcctcctccacggcccaggccgagaccaccgcgccgtccgtcgcgccccacgagacggct
tcgaccggggatcccgaggccccgcagccggctgagccggccgaccgcgacggcgacccg
gcacaggacgcctga
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