Nocardioidaceae bacterium TYQ2: KLP28_04725
Help
Entry
KLP28_04725 CDS
T08881
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03420
Nucleotide excision repair
nbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KLP28_04725 (pcrA)
03430 Mismatch repair
KLP28_04725 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_04725 (pcrA)
Enzymes [BR:
nbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KLP28_04725 (pcrA)
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KLP28_04725 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KLP28_04725 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QWC86035
UniProt:
A0A975R7M9
LinkDB
All DBs
Position
complement(1010983..1013535)
Genome browser
AA seq
850 aa
AA seq
DB search
MTATSETTSATGSTETGRAARASGPTPDQLLAGLNEPQREAVQHAGPPLLVVAGAGSGKT
RVLTRRIAWLISQRGAHPGSILAITFTNKAAAEMRERVEDLVGRRARIMWVSTFHSACVR
ILRREIGRLEIKPTFTIYDAADSRRLMTLVCKELELDAKKFPPRSVLAWVSNAKNELKDA
EDCAEEATSDVERAHAKAYALYQRRLVDAHALDFDDLIMTTVRLFQTFPEVREAYRRRFR
HVLVDEYQDTNHAQYALVHQLCGYDPENPAGDPLTASGGEADQPAEPRVEPSELMVVGDA
DQSIYAFRGANIRNIMDFESDFPDARTVMLEQNYRSTQTILTAANSVISRNRGRKDKRLW
SEAGDGEKIIGYVADDERDEARFVADRIGTLTKDEDVRPADVAVFYRTNAQSRVFEEVFI
RMGTPYKVVGGVRFYERAEVKDALAYLRILVNPDDEVSLRRILNTPRRGIGDRAEAMVAA
YAEREGTSFWGALTRAEKAPGIASRSLSSIRSFVAVVEELTQMVDAGERADVVLEAMLTR
TGYLPELEDRIAETHDPQDETRVENLAELVAVAREFADEAAAEAARAAAGTDDGDDGDDA
DADADATDDDEPELPGLSAFLERVALVADADQIPDTPAEGDGPEPGVVTLMTLHTAKGLE
FPVVFLTGLEDGIFPHQRALGDPAELEEERRLAYVGLTRAERRLHVSRALMRSAWGAPAH
NPASRFLAELPVDLVDWLRTEAEQTSWGRQVAPGGSAIGGGDGRTPIRPLTRRVNRSFDS
ASLRADAAAKASKGRDVPVLEPGDKVSHDSFGLGTVVAVDGSGQQSTASIDFGSAGVKRL
LLRYAPVEKL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccagcgagacgacctcagccaccgggagcaccgagaccggcagggccgcg
cgggcctcgggtccgacccccgaccagctgctcgcgggcctcaacgagccgcagcgcgaa
gcggtgcagcacgccggtccgccgctcctcgtcgtcgcgggcgcgggctcgggcaagacg
cgggtgctcacccggcgcatcgcatggctgatctcccagcgcggcgcccacccgggctcg
atcctcgcgatcaccttcaccaacaaggccgccgccgagatgcgcgaacgcgtcgaggac
ctggtcggccgccgcgcccgcatcatgtgggtctccacgttccactccgcctgcgtacgc
atcctgcgccgcgagatcgggcggctcgagatcaagccgaccttcacgatctacgacgcg
gccgactcgcgacggctcatgacgctggtgtgcaaggagctcgagctcgacgccaagaag
ttcccgccccgctcggtcctggcctgggtctccaacgcgaagaacgagctgaaggacgca
gaggactgcgccgaggaggccacgagcgacgtcgagcgggcgcacgcgaaggcgtacgcg
ctctaccagcgacgcctcgtcgacgcccacgcgctggacttcgacgacctgatcatgacg
acggtgcgcctgttccagaccttccccgaggtgcgcgaggcctaccggcggcggttccgt
cacgtgctggtcgacgagtaccaggacaccaaccacgcgcagtacgcgctggtgcaccag
ctgtgcggctacgaccccgagaaccccgccggcgacccgctgaccgcgagcggcggtgag
gccgaccagcccgccgagccgcgggtggagccgtcggaactgatggtcgtcggcgacgcc
gaccagtcgatctacgccttccgcggtgccaacatccgcaacatcatggacttcgagtcc
gacttccccgacgcccgcacggtgatgctcgagcagaactaccgctccacccagacgatc
ctgaccgcggcgaactcggtgatctcccgcaaccgcggtcgcaaggacaagcgcctgtgg
tccgaggccggcgacggcgagaagatcatcggctacgtcgccgacgacgagcgcgacgag
gcccgcttcgtcgccgaccgcatcggcacgctgaccaaggacgaggacgtgcggcccgcc
gacgtcgcggtgttctaccgcaccaacgcgcagtcccgggtgttcgaagaggtcttcatc
cggatgggcacgccctacaaggtcgtcggcggggtgcgcttctacgagcgcgccgaggtc
aaggacgctctcgcctacctgcgcatcctggtcaaccccgacgacgaggtctccctgcgt
cgcatcctgaacacgccacgtcgcggcatcggcgaccgggccgaggcgatggtggcggcg
tacgccgagcgcgagggcaccagcttctggggcgccctgacccgcgccgagaaggcgccg
ggcatcgcctcgcggtccctgtcgtccatccggtccttcgtcgcggtggtggaggagctc
acccagatggtcgacgcgggcgagcgcgccgacgtcgtgctcgaggcgatgctcacccgc
accggctacctccccgagctcgaggaccgcatcgcggagacccacgacccgcaggacgag
acccgcgtggagaacctcgccgagctcgtcgcggtcgcgcgggagttcgccgacgaggcc
gccgcggaggcggcacgcgccgcggccgggaccgacgacggtgacgacggtgacgacgcg
gacgccgacgccgacgcgacggacgacgacgagcccgagctgcccggtctgtccgcgttc
ctcgaacgcgtcgccctggtcgccgacgccgaccagatccccgacacccccgccgagggc
gacggccccgagccgggggtcgtgacgctgatgaccctccacaccgcgaagggactggag
ttcccggtcgtcttcctgaccggtctcgaggacggcatcttcccccaccagcgagccctc
ggcgaccccgccgagctcgaggaggaacgacgcctggcgtacgtcggcctcacccgcgcc
gagcgcaggctccacgtctcccgggccctgatgaggtcggcctggggggcgccggcgcac
aacccggcgagcaggttcctcgccgagctgcccgtcgacctggtcgactggctgcgcacc
gaggccgagcagacctcgtggggccggcaggtcgcccccggcggctccgcgatcgggggt
ggcgacgggcgtacgccgatccgacccctcacccggcgggtcaaccggtccttcgactcg
gcctcgctgcgtgccgacgccgcggccaaggcgagcaagggccgcgacgtgcccgtgctg
gagcccggcgacaaggtctcccacgactccttcgggctcggcaccgtcgtcgccgtcgac
ggctccggccagcagtcgaccgcctcgatcgacttcggctccgccggggtcaagcggctg
ctgctgcgctacgccccggtcgagaagctctga
DBGET
integrated database retrieval system
