Nocardioidaceae bacterium TYQ2: KLP28_05950
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Entry
KLP28_05950 CDS
T08881
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KLP28_05950 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nbt02000
]
KLP28_05950 (rhaS)
Transporters [BR:
nbt02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
KLP28_05950 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QWC86241
UniProt:
A0A975MJ74
LinkDB
All DBs
Position
complement(1274065..1275111)
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AA seq
348 aa
AA seq
DB search
MSITKSFTKRTLAVLAVSGTLALSACGGDSGGSADSGSGSGSSEEQVSVTMLPKNLGNPY
FDTSTQGARAAAQQVGAEFEEVGPQEATPDAQVQYINTAAQQGRDALILSANDPSAVCDA
LDQARSAGTAIVTFDSDTEPECRDLFINQATAEGIASAQVELIAEQIDGDGQIAILSASA
NATNQNTWIDLMREQIESDYPDIELVDVVYGNDDDQESFDKTAALLQSNPDLEGIVSPTT
VGIAAAARYLSDSQFDGEVALTGLGTPNQMREYVEGGTVEAFALWNPEDLGALATYAATA
LASGEIEGAEGDSFSAGELGEFTVDADSTVLLGDPFVFDAENIGDFDF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcacgaagtcgttcaccaagcgcaccctcgccgtcctcgcagtcagcggcacg
ctggcgctctccgcctgcggcggcgacagcggcggctcggccgactccggctcgggctcc
ggctcgagcgaggagcaggtcagcgtcaccatgctgccgaagaacctcggcaacccctat
ttcgacacctccacccagggtgcccgtgcggcagcccagcaggtcggcgccgagttcgag
gaggtcggtccccaggaggccacccccgacgcgcaggtgcagtacatcaacaccgccgcg
cagcagggccgcgatgccctgatcctgtcggccaacgacccgtccgccgtctgcgacgct
ctcgaccaggcgcgctccgccggcaccgcgatcgtcaccttcgactccgacaccgagccc
gagtgccgtgacctcttcatcaaccaggccaccgccgagggcatcgcctcggcccaggtc
gagctgatcgcggagcagatcgacggcgacggccagatcgcgatcctctccgccagtgcc
aacgcgacgaaccagaacacctggatcgacctgatgcgcgagcagatcgagtccgactac
cccgacatcgagctcgtcgacgtggtctacggcaacgacgacgaccaggagtccttcgac
aagaccgctgcgctgctgcagtccaacccggacctcgagggcatcgtctccccgaccacg
gtcggcatcgccgccgcggcgcgctacctgtccgacagccagttcgacggtgaggtcgcc
ctgaccggtctgggcacgccgaaccagatgcgcgagtacgtggagggtggcaccgtcgag
gccttcgccctgtggaaccccgaggacctcggtgccctggccacctacgccgccaccgcc
ctggcctcgggcgagatcgagggcgccgagggcgactcgttctcggccggcgagctcggc
gagttcaccgtcgacgccgactccacagtgctcctcggcgacccgttcgtcttcgacgcc
gagaacatcggcgacttcgacttctga
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