Nocardioidaceae bacterium TYQ2: KLP28_07770
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Entry
KLP28_07770 CDS
T08881
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KLP28_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_07770
Enzymes [BR:
nbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KLP28_07770
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KLP28_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QWC86556
UniProt:
A0A975MJS6
LinkDB
All DBs
Position
1644232..1647690
Genome browser
AA seq
1152 aa
AA seq
DB search
MSDPTTPFDLTGDLPQGTWLLEASAGTGKTYAIAGLVVRHVAEGAARLDEMLVLTFGRMA
TAELRSRVRAALTDADRALARRLGGDPVPTGDTVLDHLLDATEAELRLRRRRVRDALADA
DAATIATTHQFCRLVLDSLGIAGDSDPGAELRDDLDDLVVEVADDLYLRGFAASEGAPEF
DRRTALAVARAVAGDPQARLWSDEQPGRESHSARVRARRTGFGSAVRQELERRKRRLRLL
SYDDLLSRLADALEAQDSLARRRVRDRWRVVLVDEFQDTDPVQWQVLSRAFAGHATMVLV
GDPKQAIYAFRGGDVQTYLTAAEQCDHRATLATSYRADGELAARVDAVLDGAELGHPGIV
ARPVTAHHQQARLADADGTPSDRPVRLRVLDRARAGGTPSRLPIVPSARSAVMKDLAGEI
AALLDAGATFAGRPLRPADVGVLCRTSGQCEAARSALAAAGIRAVTGGGGSVLRTEAADH
WTRLLEALVAPTRPSRVRNAATTVFRGLEPEDLLDTSRAERLAEELQDLADLGRRQGPAA
VLTACVERHDLYARVMAREDGERLLTDLRHLGEVLHDVSVRERLSLAALATWLRRQREED
RTSAADERSRRLDSDSDAVQVMTIHGSKGLEFPVVMLPSVWDHHVREERFPLLHGPDGTR
WRDVGGMPFPREVLEGAAAEQAGEELRLLYVAMTRAQSRLVCWWAPTSSHTSSSPLHRML
LGRTPGRADVPEAVPVQTDEHVQDWLSRWEQAGGMTVELVGPAREVVRPPSPDAGVIAAR
RWDRTVDQQWRRTSYSALTAAAEAYDEAYDQANDQAYDRARDAGLDTTADPEVTLRDDEE
VPPALGAPATGTTGVPSPLQGLPGGAAFGSLVHAVLEHVDLEAPPSQHSGATGEGRRDAL
RTQVAEQLPRWPVGDLDEDALADGLAAVVETPLGPLAPGLTLATLGSADRLAELDFEIPL
AGGDGLGPSPDSAPRPDPSGGTLADLAGLWRTHLRSDDPLYAFADRLAGPGYAAQHLRGY
LSGSLDLVLRHDGRYLVADYKTNLLGEAVETDDLAAYTPDRLAAAMVGSTYPLQALLYAV
VLHRLLRWRVADYDPESHLGGVLYLYVRGMAGAATPVVDGHPTGVFSWRPPAALVVAASD
LLAGLRAGVEVP
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatccgaccacccccttcgacctcaccggcgacctgccgcagggcacgtggctg
ctggaggcctcggcgggcacgggcaagacgtacgccatcgcgggcctcgtggtccgccac
gtcgccgagggcgcggcccgtctcgacgagatgctcgtgctgaccttcggtcgcatggcg
accgccgagctgaggtcgcgcgtacgcgccgcgctcaccgacgcagaccgggccctggca
cgccggctgggcggtgaccccgtcccgacgggcgacacggtgctggaccacctcctggac
gcgactgaggccgagctgcggctgcggcgccggcgggtgcgcgacgcgctcgccgacgcg
gacgccgccaccatcgccaccacccaccagttctgtcggctcgtgctcgactccctcggc
atcgcgggcgactccgacccgggcgccgagctccgcgacgacctcgacgacctcgtcgtg
gaggtcgccgacgacctgtacctgcggggcttcgccgcgtcggagggcgcacccgagttc
gaccggcgcaccgccctggccgtcgcgcgcgccgtcgcgggcgacccgcaggcgcggctg
tggtcggacgagcagcccggacgcgagtcccacagtgcgcgggtgcgggcgcggcgcacg
ggattcgggtcggcggtgcgtcaggagctcgagcgtcgcaagcggcggctgcggctgctc
tcctacgacgacctgctctcccgtctcgcggacgccctcgaggcgcaggactccctggcg
cggcgacgggtccgggaccggtggcgcgtcgtgctggtcgacgagttccaggacaccgac
ccggtgcagtggcaggtgctctcccgcgcgttcgccggccacgccacgatggtgctggtc
ggcgaccccaagcaggcgatctacgccttccgtggcggagacgtgcagacctacctgact
gcggccgagcagtgcgaccaccgggcgacgctggcgacgagctaccgcgccgacggcgag
ctcgcggcccgggtggacgcagtgctcgacggcgccgagctggggcacccgggcatcgtg
gcccgccctgtcaccgcccaccaccagcaggctcgcctggcggacgccgacggcactccg
tcggaccggccggtgcggctgcgggtgctcgaccgggcgcgggccggcggcaccccgtcg
cggctgccgatcgtgccgtcggcgcggtcggcggtcatgaaggacctcgccggcgagatc
gcggcgctgctcgacgccggggccacgttcgccgggaggccgttgcggcccgcggacgtc
ggcgtgctgtgccgcacctccggccagtgcgaggcggcacggtccgcgctggcggccgcg
ggcatccgggcggtcaccggtggcgggggcagcgtgctgcgtacggaggccgccgaccac
tggacgcggctgctcgaggcgctggtggcgcccaccaggccgagccgggtgcgcaacgcg
gcgacgacggtgttccggggcctggagccggaggacctgctggacacgtcccgggcggag
cgtctcgccgaggagctgcaggacctcgccgacctggggcgacgtcagggcccggccgcg
gtcctcacggcgtgcgtggagcgtcacgacctgtacgcacgggtgatggcccgcgaggac
ggtgagcggctgctgaccgacctgcggcacctcggcgaggtgctgcacgacgtgtcggtg
cgcgaacgcctctcgctcgccgcgctcgcgacgtggctgcgccgtcagcgcgaggaggac
cgcaccagcgcggccgacgagcgatcccggcggctcgactccgactccgacgcggtgcag
gtcatgacgatccacggctcgaagggcctggagttccccgtggtcatgctgccctcggtg
tgggaccaccacgtgcgcgaggagcggttcccgctgctgcacggccccgacggcacacgg
tggcgtgacgtcggggggatgccgttcccccgggaggtgctcgagggcgcggcggccgag
caggcgggggaggagctgcggctgctgtacgtcgcgatgacccgggcgcagtcgcggctg
gtgtgctggtgggctcccacgtcctcgcacacgtcgtcctcaccgctgcaccgcatgctg
ctggggcgtacgccgggccgtgccgacgtgcccgaggcggtgccggtgcagaccgacgag
cacgtgcaggactggctgagccgctgggagcaggccggcggcatgacggtcgagctcgtc
ggaccggcccgcgaggtcgtcaggcctccgtcgccggacgcgggcgtcatcgcggcgcgc
cgctgggaccgcaccgtcgaccagcagtggcggcgcacgtcctactccgccctgaccgcg
gcggccgaggcgtacgacgaggcgtacgaccaggcgaacgaccaggcgtacgaccgggcc
cgtgacgccggcctcgacaccacggcggaccccgaggtgacgctgcgggacgacgaggag
gtgccgccggccctcggtgccccggcgaccgggacgacgggtgtgccctcgccgttgcag
gggctgcccggcggtgccgcgttcgggtcgctggtgcacgcggtgctcgagcacgtcgac
ctcgaggccccgccctcccagcactccggggcgacgggcgaggggcgacgggacgcgctg
cgtacgcaggtcgccgagcagctgccgcgctggccggtgggggacctcgacgaggacgcc
ctcgccgacggtctcgccgccgtcgtcgagacaccgctgggtccgctggcgcccgggctc
acgctcgccacgctggggtcggcggaccggctggccgagctggacttcgagatccccctc
gcggggggtgacggactgggcccgtcccccgactccgcgccgcgtccggacccgtccggc
ggcacgctcgcggacctcgcggggctgtggcgtacgcacctgcgctccgacgacccgctg
tacgccttcgccgaccgcctcgccggccccggctacgcagcacagcacctgcgcggctac
ctctcgggatcactggacctggtgctgcgccacgacggccgctacctggtcgcggactac
aagaccaaccttttgggggaggccgtggagaccgacgacctcgcggcgtacacccccgac
cggctcgcggcggcgatggtcggctcgacctacccgctgcaggcgctgctgtacgccgtc
gtgctgcaccgcctgctgcgctggcgggtggccgactacgaccccgagtcgcatctgggc
ggcgtgctctacctgtacgtgcgcggcatggccggcgcggcgacgccggtcgtcgatggg
catcccaccggtgtcttctcgtggcgtccgccggccgcgctggtcgtcgccgcgtcggac
ctgctggcgggtctgcgggcgggggtggaggtgccgtga
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