Nocardioidaceae bacterium TYQ2: KLP28_07775
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Entry
KLP28_07775 CDS
T08881
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KLP28_07775 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_07775 (recD)
Enzymes [BR:
nbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KLP28_07775 (recD)
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KLP28_07775 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
NAT10_TcmA_helicase
nSTAND3
DEAD
TraI_hel_assoc_N
Herpes_Helicase
AAA_28
SLFN-g3_helicase
AAA_29
T2SSE
PhoH
Mg_chelatase
cobW
NTPase_1
FtsK_SpoIIIE
NACHT
AAA_17
DO-GTPase1
SH3_13
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QWC86557
LinkDB
All DBs
Position
1647687..1649600
Genome browser
AA seq
637 aa
AA seq
DB search
MTASTDTDLDPWRPGRVLGRQVPDLLRAWNDADGLQAADLHLAVTLGELAGEADPEVLLA
CALAVRAVREGSVCLHLGEVEHPGAEQVPPLPDPESWAARVAASPLVGPDAPWVWERHRL
YLHRHLEDERQVAADLAAREESASVGPGGDGLEEALDEAYGLGAAGGEGAGEGEGAYADQ
RAAVRTACTHRTSIITGGPGSGKTTTLARLIAVLMRLHAARSPEAPPLRVHLAAPTGKAA
ARMAQSVRAAAEHPDFGFDDLRERLTALPATTVHRLLGSRPGHGSRFRHDRALRLPADVV
VVDEASMLSLTLTARLLEALRPGARLVLLGDADQLASVDAGAVLTDMVEGLERRADPPVA
RLRGSRRFTGEIGDLAAAVRDGDVAATLRHLESARSGPEPHGVRWVPLDGAPSEAGGREL
QQLMLTYARSLDEAGRTGDPEHALAALGGFRLLTAHREGPYGAGTWNRLTTRLLGASLQR
HLPLSYVGRPLLVERNDPALGLFNGDTALVAAAPAGGEGSAGLVGVVDDGSRSGRVLGLP
RLAGTTTAYAMTVHRAQGSQFDHVAVLLPDADSRVLTRQLLYTALTRASGRVTLIGTEAS
VEAAVGRSAGRATLLAARLSEPTDETGSGTGIRAADA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcatcgaccgacaccgacctggacccgtggcggcccggccgcgtgctgggccgg
caggtgcccgacctgctgcgcgcctggaacgacgccgacggtctgcaggccgccgacctg
catctcgcggtcaccctcggtgagctcgccggggaggccgacccggaggtgctgctggcg
tgcgcgctggcggtgcgcgccgtccgggagggctcggtgtgcctgcacctcggcgaggtc
gagcaccccggcgccgagcaggtgccgccgctgccggaccccgagtcctgggctgcccgg
gtggccgcgagccccctggtgggcccggacgcaccgtgggtctgggagcggcaccggctc
tacctgcaccgccacctcgaggacgagcgccaggtcgcggccgatctcgccgcgcgcgag
gagtccgcgtcggtcgggcccggtggtgacggcctcgaggaggcgctcgacgaggcgtac
ggcctcggcgcggcagggggcgagggcgccggtgagggcgagggggcgtacgcggaccag
cgcgccgcggtgcgcaccgcctgcacccaccgcacctcgatcatcaccggcggccccggg
tcgggcaagacgacgacgctggcccggctcatcgccgtgctgatgcggctgcacgcggcc
cggtcgccggaggcgccgccgttgcgggtgcacctggccgcgcccaccggcaaggcggca
gcccgtatggcccagtcggtgcgggcggcggccgagcacccggacttcgggttcgacgac
ctgcgcgagcggttgacggcgctgccggccacgacggtgcatcgcctgctcggctcccga
cccgggcacggctcacgcttcaggcacgaccgtgcgctgcgcctcccggccgacgtggtc
gtggtcgacgaggcgtcgatgctcagcctcaccctcaccgcccggctcctggaggcgctg
cggcccggagcccggctggtgctgctcggcgacgccgaccagctcgcctccgtcgacgcc
ggggcggtgctcaccgacatggtcgagggactcgaacgccgcgccgatccccccgtggcg
cgcctgcgcggctcgcgtcgcttcaccggtgagatcggcgacctcgctgccgccgtgcgc
gacggggacgtcgcggcgacgctgcgtcacctggagtccgcccggtccgggcccgagccg
cacggcgtgaggtgggtgccgctcgacggtgctccctccgaggcgggcgggcgcgagctg
cagcagctcatgctcacgtacgccagatcgctcgacgaggcgggtcgcaccggcgatccc
gagcacgccttggcagcgctggggggcttccggctgctgacggcccaccgggagggcccg
tacggcgcgggcacctggaaccggctgacgaccaggctgctcggcgcgagcctccagcgg
cacctgcccctgtcgtacgtcgggcgcccgctgctggtcgagcgcaacgatcccgcgctg
gggctcttcaacggcgacacggccctcgtcgccgccgcaccggcgggcggtgaggggtcc
gccggtctcgtcggtgtggtggacgacggcagcaggtcgggacgcgtgctggggttgccg
cggctggcgggcacgaccacggcgtacgcgatgacggtgcaccgggcgcagggcagccag
ttcgaccacgtggcggtgctgctgccggacgcggactcccgggtgctgacccgtcagctg
ctctacaccgccctgacgcgcgcgtcagggcgggtgacgctcatcggcaccgaggcctcc
gtcgaggccgcggtcggtcggtcggccggacgcgcgacgttgctggcggcccggctgtcg
gagccgacggacgagaccggcagcgggaccggcatcagggcagccgacgcgtga
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