Nocardioidaceae bacterium TYQ2: KLP28_10850
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Entry
KLP28_10850 CDS
T08881
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KLP28_10850
09124 Replication and repair
03420 Nucleotide excision repair
KLP28_10850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbt03021
]
KLP28_10850
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_10850
Enzymes [BR:
nbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KLP28_10850
Transcription machinery [BR:
nbt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KLP28_10850
DNA repair and recombination proteins [BR:
nbt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KLP28_10850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QWC84105
UniProt:
A0A975MF79
LinkDB
All DBs
Position
complement(2257911..2259545)
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AA seq
544 aa
AA seq
DB search
MSNGPLIVQSDKTLLLEVDHADAAEARKAIAPFAELERSPEHVHTYRITPLALWNARAAG
HDAEQVVSALIDHSRYPVPHALLVDIAETMDRYGRLTLDKHPVHGLVLSSTDAPVFAEVL
RAKKVAGMLGARVDEHTVAVHPSERGNLKQALLKLGWPAEDWAGYVDGEAHAIDLATDGW
DLRPYQAEAAQSFWDGGSGVVVLPCGAGKTIVGAAAMAHAKATTLIMVTNTVSARQWKDE
LVRRTSLTEDEIGEYSGTRKEIKPVTIATYQVMTTRRKGAYTHLELFDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIESQGYIAP
ADCVEVRVTLPDSERLVYATAEPEEKYRLASTTRSKTRLAQKLVEKHKGEPTLVIGQYID
QLDELGEALGAPVIKGETTVPMREKLFEQFRTGELDLLVVSKVANFSVDLPGATVAIQVS
GSFGSRQEEAQRLGRLLRPKDDGHSARFYTLVSRDTIDAEFAANRQRFLAEQGYAYEIVD
ADDI
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacggccccctgatcgtgcagtccgacaagaccctcctgctggaggtcgaccac
gccgacgccgccgaggcgcgcaaggcgatcgcaccgttcgcggagctggagcgctccccc
gagcacgtgcacacctaccgcatcaccccgctggcgctgtggaacgcacgcgccgccggt
cacgacgccgagcaggtcgtctccgcgctcatcgaccactcgcgctacccggtcccccac
gcgctgctggtcgacatcgccgagacgatggaccgctacggacgcctcacgctcgacaag
cacccggtgcacggcctggtgctctcgagcacggacgcacccgtcttcgccgaggtgctg
cgcgccaagaaggtcgccggcatgctgggcgcccgcgtggacgagcacaccgtcgccgtg
cacccctccgagcggggcaacctcaagcaggcgctgctcaagctcggatggcccgccgag
gactgggccggctacgtcgacggggaggcccacgccatcgacctcgcgaccgacggctgg
gacctgcgcccctaccaggccgaggccgcccagtcgttctgggacggaggctccggtgtc
gtcgtgctgccctgcggcgccggcaagacgatcgtgggcgccgccgcgatggcccatgcc
aaggccacgacgctgatcatggtcaccaacaccgtgtcggccaggcagtggaaggacgag
ctcgtacgccgcacctccctcaccgaggacgagatcggcgagtactccggcacccgcaag
gagatcaagccggtcaccatcgcgacctaccaggtgatgacgacgcggcggaagggtgcg
tacacccacctcgagctcttcgacgcccgcgactggggcctggtcgtctacgacgaggtg
cacctgctgcccgcccccatcttccggatgaccgccgacctgcaggcgcggcgacggctc
gggctcaccgcgacgctggtgcgcgaggacggccgcgagggtgacgtcttcagcctgatc
ggtcccaagcgctacgacgcaccctggaaggacatcgagtcccagggctacatcgcgccc
gccgactgcgtcgaggtgcgggtgacgctgccggactccgagcgcctcgtgtacgccacg
gccgagcccgaggagaagtaccgcctcgcctccaccacccggtccaagacgcggctcgcc
cagaagctggtcgagaagcacaagggcgagccgacgctggtgatcgggcagtacatcgac
cagctcgacgagctcggcgaggccttgggagcaccggtgatcaagggcgagaccaccgtg
ccgatgcgcgagaagctcttcgagcagttccgcaccggcgagctcgacctgctcgtggtc
agcaaggtcgcgaacttctccgtcgacctgcccggcgcgacggtggcgatccaggtctcc
ggctcgttcgggtcacgccaggaggaggcccagcggctcggacggctgctccgaccgaag
gacgacgggcactccgcgcgcttttacaccctggtcagccgggacacgatcgacgcggag
ttcgccgccaaccggcagcggttcctcgccgagcaggggtacgcgtacgagatcgtcgac
gccgacgacatctga
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