Nocardioidaceae bacterium TYQ2: KLP28_12660
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Entry
KLP28_12660 CDS
T08881
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt03420
Nucleotide excision repair
nbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KLP28_12660
03430 Mismatch repair
KLP28_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbt03400
]
KLP28_12660
Enzymes [BR:
nbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KLP28_12660
DNA repair and recombination proteins [BR:
nbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KLP28_12660
MMR (mismatch excision repair)
Other MMR factors
KLP28_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QWC86972
UniProt:
A0A975MKZ1
LinkDB
All DBs
Position
2614190..2617561
Genome browser
AA seq
1123 aa
AA seq
DB search
MGDDFTLSEEQWAAVSAPLAPAVVIAGAGSGKTALMAARVVFLVANDLVRPDEVLGLTFT
TKATAELASRIRGALERAGLLDRDLDRDLDRDLDRDLEVDHAYEVGSGEAPEVERLEPTV
STYNAYAASLLTEHGLRVGHEPDTRVVSDGARFQLAERAVASHRKEVRELSDHPPTVIEN
LLALESELAEHLRQPDDVRRFDDQLLAESEAARDRGEGQKELCDRIASAVARRRELLGLV
QDYRAQKSRLGLMDFSDQVALAARLALEHPAVGEAERARFRVVLLDEYQDTSVAQARMLA
ALFSGPDAARGLGHAVTAVGDPNQAIYGWRGASVSNIVRFAEFFAPAQGEPLTFSLTVNR
RSDERILEVANAVAAPLYDARQQVARLVAKPTAATGEVRLRVHETAAEELAWAAAAIKRA
GTARSSGGEGVPWREIGVLVRDNAHAAAVFDSLTALEVPVEIVGLKGLLRLPEVAEVVAT
LNLVQDLADNASLLTLLAGPRWAVGPRDLALLGRRARELVGQGGRRAPVAPGEQVVPDLP
ARLDDAVAGSDPVDVPALVDALEDPGPAPFSAEARERFELLAGELRRLRAQAGEPLLELV
RRVVDVTGIDVELASSHSPAAPARRDNLDLFVKAVADFSGLDGQASLNSLLAWIRVEEDG
QGLDVATPGESDSVKLLTVHRSKGLEFDHVWLLGVCEQRFPNTTARPTWTTTPKVLPHPL
RGDHRDLPALRSYDKTGREEFDAARTAYQQTEELRLAYVALTRARHRLWVSSYVWTEGRK
TPLGASPYQQTIREVLARHGVEPDLWVPTPPKGEPNPLAAQAQEYAWPVTVPTLEARRRR
EAAELVALRRHDLDDLGDIHGRDRAVDCVGHGGPVAPVLARFGDLEDGLDLTERALVAEW
DGELDRLVSEARERDTDTIVVPLPSHLSATSLARLREDPDAFARDLARPMPRRPSAAGRF
GTRFHEWVESRFGQLGLLDAEDLDGRGDHHVDGLDDLAELIAAFEAGPFADRPPEAVEAP
FSLVLGGQVVRGRIDAVYAERAAEDGSPRWLLVDWKTQRSHDADPLQLAIYRLAWAELHG
VPLAQVRAAFYYVRDGALVEPSGLADRAQLEALLPDAGAAPRG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacttcaccctgagcgaggagcagtgggcggcggtctcggcgccgctggcc
ccggccgtggtgatcgccggcgcgggatcgggcaagacggcgctgatggcggcccgggtc
gtgttcctcgtcgccaacgacctggtgcgtcctgacgaggtgctgggtctgaccttcacg
acgaaggcgaccgcggagctcgcctcacgcatccgaggcgcgttggagcgggcaggtctg
ctcgaccgcgacctcgaccgcgacctcgaccgcgacctcgaccgcgacctcgaggtcgac
cacgcgtacgaggtcggctcgggcgaggcgccggaggtcgagcggctcgagcccacggtg
tcgacctacaacgcgtacgccgcctccttgctcaccgagcacggtctgcgtgtcggtcac
gagcccgacacgcgggtcgtctccgacggtgcccggttccagctcgccgagcgtgccgtc
gcctcccaccgcaaagaggtgcgggagctcagcgaccacccgccgaccgtcatcgagaac
ctcctcgcgttggagtccgagctcgcggagcacctgcggcagcccgatgacgtacgccgt
ttcgacgaccagctgctcgccgagtccgaggcggcacgcgaccgcggtgagggccagaag
gagctgtgcgaccgcatcgcctcggcggtcgcccgccgccgcgagctgctcggcctggtg
caggactaccgcgcccagaagtcgcggctgggcctgatggacttctccgaccaggtcgcg
ctcgcggcccggctcgccctggagcaccccgcggtcggtgaggccgaacgcgcgcggttc
cgcgtcgtgctcctcgacgagtaccaggacacctcggtggcgcaggcgaggatgctggcc
gcgctcttctccggaccggatgcggcgcggggactgggccacgcggtgaccgccgtgggg
gacccgaaccaggcgatctacggctggcgcggggcctcggtctccaacatcgtgcggttc
gccgagttcttcgcgccggcgcagggcgagccgctcacgttctccctcacggtcaaccgc
cggtccgacgagcgcatcctcgaggtggcgaacgccgtcgccgcccccttgtacgacgcc
cgccagcaggtcgcccggctggtcgcgaagcccaccgccgccaccggcgaggtgcgcctg
cgggtccacgagaccgccgcggaggagctcgcgtgggcagcggccgccatcaagcgggcg
ggcaccgcgcggtcgtcgggcggcgagggcgtgccgtggcgggagatcggcgtgctggtg
cgcgacaacgctcacgcggccgcggtcttcgactccctcaccgcgctggaggtgccggtg
gagatcgtcggtctgaagggtctgctgcggctcccggaggtcgccgaggtggtcgcgacg
ctgaacctggtgcaggacctggccgacaacgcctcgctgctgacactgctggccgggcct
cggtgggcggtggggccgcgggacctggccctgctggggcgacgcgcccgcgagctggtc
ggccagggcggtcggcgggcgccggtcgctcccggtgagcaggtcgtcccggacctgccg
gcgcggctcgacgacgccgtcgccgggtcggaccccgtcgacgtgcccgcactggtcgac
gccctggaggatcccgggcccgcaccgttctccgcggaggcgcgagagcgcttcgagctg
ttggccggcgagctgcgtcggctccgcgcgcaggcgggcgagcccctcctggagctcgtg
cgccgggtcgtcgacgtgaccgggatcgacgtggagctggcctcctcccactcaccggcc
gccccggcgcgccgcgacaacctggacctcttcgtcaaggccgtcgcggacttctccggg
ctggacgggcaggcgtcgctgaactccctgctcgcgtggatccgggtggaggaggacggg
cagggtctcgacgtcgccacgcccggcgagagcgactcggtcaagctcctcacggtccac
cgctccaagggcctcgagttcgaccacgtgtggctgctgggcgtctgcgagcagcggttc
ccgaacaccacggcgaggcccacctggaccacgacgccgaaggtgctgccccaccccttg
cgtggggaccaccgtgacctccccgcgctgcggtcctacgacaagaccggacgcgaggag
ttcgacgcagcgcgcacggcgtaccagcagaccgaggagctgcgcctggcgtacgtcgcc
ctgacccgcgcgcggcaccgcctgtgggtctcctcctacgtgtggaccgagggacgcaag
acgccgctgggcgcgtcgccgtaccagcagaccatccgggaggtgcttgcccggcacggc
gtcgagcccgacctgtgggtcccgacgccgccgaagggcgagccgaaccccctggccgcg
caggcgcaggagtacgcgtggccggtcaccgtgccgaccctggaggcgcgacgacgccgc
gaggcggccgagctcgtcgccctgcgccgccacgacctcgacgacctcggcgacatccac
ggccgcgaccgggcggtcgactgcgtcgggcacggaggccctgtcgccccggtgctggcc
cggttcggggacctcgaggacggcctggacctcaccgagcgggcgctggtcgccgagtgg
gacggcgagctggacagactcgtctcggaggcccgtgagcgggacaccgacacgatcgtg
gtgccgcttccctcgcacctctccgcgacgtcactggcgcggctgcgtgaggacccggac
gccttcgcccgggacctcgcccgccccatgcctcgtcggccgtcggccgcggggcggttc
ggcacccggttccacgagtgggtggagagccgcttcggtcagctcggtctgctcgacgcc
gaggacctcgacgggcggggcgaccaccacgtcgacggtctcgacgacctggccgagctg
atcgccgccttcgaggcgggaccgttcgccgaccgcccgccggaggcggtcgaggctccc
ttctcgctggtgctcggcggacaggtcgtccgcggccgcatcgacgccgtgtacgccgag
cgcgctgccgaggacgggtcgccccggtggctcctggtggactggaagacccaacgcagc
cacgacgccgacccgctgcaactggcgatctaccggctcgcctgggcggagctgcacggg
gtgccgctcgcccaggtgcgcgcggcgttctactacgtccgcgacggggcactcgtcgag
ccctccgggctcgccgaccgggcgcagctggaggcgctcctccccgacgcaggtgctgca
ccccgtggctag
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