Nocardioidaceae bacterium TYQ2: KLP28_13945
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Entry
KLP28_13945 CDS
T08881
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt00630
Glyoxylate and dicarboxylate metabolism
nbt00680
Methane metabolism
nbt01100
Metabolic pathways
nbt01120
Microbial metabolism in diverse environments
nbt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KLP28_13945 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
KLP28_13945 (fdhF)
Enzymes [BR:
nbt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
KLP28_13945 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4
Fer4_7
Fer4_6
Fer4_8
Fer4_21
Fer4_10
Fer4_2
NADH-G_4Fe-4S_3
Fer4_9
LdpA_Fe-S-bd
Fer4_NDSU1
Fer4_15
Fer4_16
Fer4_18
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
QWC84656
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All DBs
Position
2894586..2897699
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AA seq
1037 aa
AA seq
DB search
MTAQSRPHDVDRKARWAPLSEDAAADPAETVTVTVDGIEVPGVKGRPLVEVLTDGEDSAK
AFPSICYHESLGPIQTCDACMVEIDGQVVRACAVEATEGLQVSLNGRSAEAREEAGQRLV
RKHTLYCTVCDHNDGHCTLKSGVEATGLLHEKIGFEPKPYEVDDSHAFYRYDPDQCILCG
RCVEACQDVQVTETLSINWDDDNPRVLWDGGALAGESSCVGCGHCVTVCPCNALLEKSMV
GRHGLMTDWPEETRELAIDLVKDVEPTIGYGPLYEVSRLESKARMSTIDKTKTVCTYCGV
GCSFNIETRGREILRVQPSEEAPANNISTCVKGKFGWDYVNAPDRLTTPLIRDGHRFREA
SWDEAYALIADKMSEIIARDGSDAVSVIGSSKATNEESYLVQKLARQVFGTHNTDNCSRY
CQAPATQGLWRTVGYGGDAGSISDIERAELVLIVGSNTAAAHPVIASRVRRSQKLAGHQL
IVADLRKHEMAERADVFLKPNPGTDMVWLSALSRYIFDQGWAAEAFLKEHVNDVEEYRAS
LEKFTLEYAEERTGISVEQLKDVAKRIVDAGSVSALWAMGVTQHTMGSDTSTAISNLLLV
TGNYGRPGTGAYPLRGHNNVQGCSDFGTINSFYPGYQPVEDEEVAAKFQKAWGTELKREP
GLDNHGMIEQVHAGNLKAMIVVGEEMSLVDANINYVQEALAALEFFVVTELFFSKTCEYA
DVVLPAAASLEKDGTFTNTERRVQRINKVMEPIGDSRADWEILQGIADRMGYDWGYTHPS
MIMDEVADLTPLFAGVSYDRLEGFDSLQWPVAADGTDTPLLYTDGFHFDDGKARLFALEE
HEPTDQRSEEFPLHINNGRELEHFHEGNMTLRSKGLSHIVPDTYVEMNRATAEAQGGLKT
GDWVRLISPRGEMEARILLDEGVADFEVWVPMQAGEINRLTSNETDKDSHTPAYKELAAR
LEKIDHSDGDRRRRRRAADRGRQGERDETQDPEGRPIPAHHHRYGNSSRQYGVLVEEKWS
REDYVAPPEREPKGAKA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcagtcccgcccgcacgacgtcgaccgcaaggcccgctgggccccgctgtcc
gaggacgctgctgcggaccccgccgagaccgtgacggtcaccgtcgacggcatcgaggtg
ccgggggtcaagggacggccgctggtcgaggtgctcaccgacggtgaggactccgcgaag
gcgttcccgtcgatctgctaccacgagtcgctcggcccgatccagacctgcgacgcctgc
atggtcgagatcgacgggcaggtcgtgcgcgcctgcgccgtcgaggccaccgagggcctg
caggtctcgctgaacggccgctcggccgaggcgcgcgaggaggcgggacagcggctggtg
cgcaagcacacgctctactgcaccgtctgcgaccacaacgacggtcactgcacgctcaag
agcggcgtcgaggccaccggtctgctccacgagaagatcgggttcgagccgaagccgtac
gaggtcgacgactcccacgccttctaccgctacgaccccgaccagtgcatcctgtgcggt
cgctgcgtcgaggcctgccaggacgtgcaggtcaccgagacgctgtcgatcaactgggac
gacgacaacccgcgcgtgctgtgggacggcggcgcgctggctggggagtcctcgtgcgtc
gggtgcggccactgcgtgacagtctgcccctgcaacgcgctcctggagaagtccatggtc
ggccgccacggcctgatgaccgactggcccgaggagacccgcgagctcgcgatcgacctg
gtcaaggacgtcgagccgacgatcggctacggccccctctacgaggtctcgcgcctggag
tccaaggcgcgcatgtcgacgatcgacaagaccaagacggtctgcacctactgcggcgtc
ggctgctccttcaacatcgagacgcgaggccgcgagatcctccgcgtccagccgagcgag
gaagcccccgccaacaacatctcgacctgcgtcaagggcaagttcggctgggactacgtc
aacgcccccgaccgcctcacgacgccgctgatccgcgacggccaccggttccgcgaggcc
agctgggacgaggcgtacgccctcatcgcagacaagatgagtgagatcatcgcgcgcgac
ggctccgacgccgtctcggtgatcgggtcctccaaggcgaccaacgaggagtcctacctc
gtccagaagctcgcccgccaggtcttcggcacccacaacaccgacaactgctcgcgctac
tgccaggcgccggccacccagggcctgtggcgcacggtggggtacggcggcgacgccggc
tcgatctccgacatcgagcgcgccgagctggtgctgatcgtcggctccaacaccgccgcg
gcccacccggtcatcgcctcgcgcgtgcgccgctcccagaagctcgccggccaccagctg
atcgtggcggacctccgcaagcacgagatggccgagcgcgccgacgtcttcctcaagccg
aaccccggcaccgacatggtgtggctctcggccctctcgcgctacatcttcgaccagggc
tgggccgccgaggccttcttgaaggagcacgtcaacgacgtcgaggagtaccgcgcctcg
ctcgagaagttcaccctcgagtacgccgaggagcgcaccggcatcagcgtcgagcagctg
aaggacgtcgcgaagcgcatcgtcgacgccgggtcggtctcggcgctgtgggcgatgggc
gtcacccagcacacgatgggctccgacacctccaccgccatctcgaacctgctgctggtc
accggcaactacgggcgcccgggcaccggggcgtacccgctgcgcggccacaacaacgtg
cagggctgcagcgacttcggcaccatcaactcgttctaccccggctaccagccggtcgag
gacgaggaggtcgccgcgaagttccagaaggcctggggcaccgagctcaagcgtgagccg
ggcctggacaaccacggcatgatcgagcaggtccacgccggcaacctcaaggccatgatc
gtcgtcggcgaggagatgagcctcgtcgacgccaacatcaactacgtgcaggaggccctg
gcggcgctggagttcttcgtcgtcaccgagctcttcttctccaagacctgcgagtacgcc
gacgtggtgctgcccgccgccgcctcgctggagaaggacggcaccttcaccaacaccgag
cgtcgcgtccagcgcatcaacaaggtgatggagccgatcggcgactcacgtgccgactgg
gagatcctgcagggcatcgccgaccgcatggggtacgactggggctacacccacccgtcg
atgatcatggacgaggtcgccgacctcaccccgctcttcgccggcgtcagctacgaccgt
ctcgagggcttcgactcgctgcagtggccggtcgcggccgacggcaccgacacgccgctg
ctctacaccgacgggttccacttcgacgacggcaaggcgcggctgttcgccctcgaggag
cacgagccgaccgatcagcgcagcgaggagttcccgctgcacatcaacaacggccgcgag
ctcgagcacttccacgagggcaacatgacgttgcggtcgaagggtctgtcccacatcgtc
cccgacacctacgtcgagatgaaccgcgcgaccgccgaggcgcagggtgggctgaagacc
ggtgactgggtgcgcctgatcagcccgcgcggcgagatggaggcacgcatcctgctcgac
gagggtgtcgcggacttcgaggtgtgggtgccgatgcaggccggcgagatcaaccgcctc
accagcaacgagaccgacaaggacagccacaccccggcgtacaaggagctggccgcccgc
ctggagaagatcgaccacagcgacggcgaccgccgtcgacgccgtcgtgccgccgaccgg
ggccgccagggcgagcgcgacgagacccaggaccccgagggtcggccgatcccggcgcac
caccaccgctacggcaacagctcacggcagtacggcgtgctggtggaggagaagtggtcc
cgcgaggactacgtcgccccgccggagcgcgagcccaagggggcgaaggcctga
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