Nocardioidaceae bacterium TYQ2: KLP28_14420
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Entry
KLP28_14420 CDS
T08881
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt02020
Two-component system
nbt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KLP28_14420
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KLP28_14420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbt03021
]
KLP28_14420
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nbt02035
]
KLP28_14420
Transcription machinery [BR:
nbt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KLP28_14420
Bacterial motility proteins [BR:
nbt02035
]
Flagellar system
Flagellar assembly proteins
Stator
KLP28_14420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_r2
NirdL-like_HTH
KORA
HTH_20
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QWC86997
LinkDB
All DBs
Position
complement(2992935..2993732)
Genome browser
AA seq
265 aa
AA seq
DB search
MPLVGHVVRETMGRVPSHVSRDDLTSAGLTALVSADRSFDGSRGVPFARYAATRIRGAVL
DELRSVDWASRSVRRRARDLDRTRSELATALGRPASTAEVASALGLSAEEVLANDEDTAR
AQVMSLQAGEGSPVELLLVDNAPAPEEVLLRGEQVAYLHEAIAELPERLRTVVEQYFLAE
RPMAEIAAELDVTESRVSQMRAEALALIRHALATALEPWLVIPHQRPDGCAARRKDAYVA
AVAARHAAGAAAGVRQAYSSVNAAG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggtcggccacgtcgtccgcgagacgatgggtcgcgtcccgagccacgtcagc
cgcgacgacctgacctccgccggactgaccgccctggtcagtgccgacaggtccttcgac
gggagtcgcggggtgccgttcgcccgctacgccgcgacccgcatccggggcgccgtgctg
gacgagctgcgcagcgtcgactgggcgtcccggtcggtgcgtcgccgcgcccgcgacctg
gaccgtacgcgctcggagctcgcgacggcactcggacggcccgcctcgaccgcagaggtc
gcctcggccctcggcctgagcgcggaggaggtgctcgccaacgacgaggacaccgctcgc
gcccaggtgatgagcctgcaggccggcgagggatcgcccgtcgagctgctgctcgtggac
aacgcccccgcgcccgaggaggtgctcctgcgaggcgagcaggtggcctacctccacgag
gcgatcgcagaactgccggagcggctgcgcacggtggtggagcagtacttcctcgccgag
cgccccatggccgagatcgcggccgagctcgacgtgaccgagtcgcgggtctcccagatg
cgcgccgaggcgctcgccctgatccgacacgccctcgcgaccgctctcgagccctggctc
gtgatcccccaccagcggcccgacggatgcgccgcgcgccgcaaggacgcgtacgtcgcc
gccgtcgcggcacgccacgccgccggggctgcggccggggtgcggcaggcgtactcctcg
gtgaacgccgcgggctga
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integrated database retrieval system
