Candidatus Nitrosopelagicus brevis: T478_0098
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Entry
T478_0098 CDS
T03537
Name
(GenBank) RecA-like protein
KO
K04482
DNA repair protein RAD51
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03440
Homologous recombination
nbv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T478_0098
03460 Fanconi anemia pathway
T478_0098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nbv04131
]
T478_0098
04121 Ubiquitin system [BR:
nbv04121
]
T478_0098
03400 DNA repair and recombination proteins [BR:
nbv03400
]
T478_0098
Membrane trafficking [BR:
nbv04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
T478_0098
Ubiquitin system [BR:
nbv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
T478_0098
DNA repair and recombination proteins [BR:
nbv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
T478_0098
RecA family proteins
T478_0098
FA (Fanconi anemia) pathway
Other FA pathway factors
T478_0098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
RecA
Zot
AAA_14
DnaB_C
AAA_24
AAA_25
ATPase_2
AAA_22
PhoH
AAA
Motif
Other DBs
NCBI-ProteinID:
AJA92734
UniProt:
A0A0A7V109
LinkDB
All DBs
Position
79699..80358
Genome browser
AA seq
219 aa
AA seq
DB search
MISSQIGSLDKIFSGGLQNGIITEISGLRGTGKTQLALQFAIEPLSNNKKILFIDTTVEF
RPERFLQMLQSRNLPASLLENLHVSRVTDTHKQIEILKTLDKNYFSLLIIDNITDLFAFE
YSKKEHLIEKNTNFGNYMINLSQITQSEDIPIIITNQIFSHDEINYQRMHAQLENYIHQK
IYLEKINNKNTCTISSPFIQNTKFNYKMTDSGIEETESI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatatcttcacagatcggttcattagataaaattttttcaggaggactacaaaatgga
ataattaccgaaatctctggtttacgaggaactggaaaaactcaacttgcattacaattt
gcaattgaaccattaagcaataataaaaaaattttattcattgataccactgtcgaattc
agacctgaaagatttcttcaaatgttacaatctcgaaatcttcctgcatcattacttgaa
aatttacatgtttcacgggttactgatactcataaacaaattgaaattctaaaaactcta
gacaaaaattatttttcgttactaattatagataacataactgatttatttgcatttgag
tattcaaaaaaagaacatctaattgaaaaaaatactaattttggtaattatatgattaat
ctttctcaaataactcaatcagaagatatcccaatcataatcacaaatcaaatcttttcg
catgatgaaataaattatcagcgaatgcatgctcaacttgaaaattacatacatcaaaaa
atctatcttgaaaaaatcaataataaaaacacctgcacgatttcatcaccatttattcaa
aatacaaaatttaattataaaatgacagattctggaatagaagaaactgaatctatttaa
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