Candidatus Nitrosopelagicus brevis: T478_0127
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Entry
T478_0127 CDS
T03537
Name
(GenBank) sugar-specific transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nbv03000
]
T478_0127
Transcription factors [BR:
nbv03000
]
Prokaryotic type
Helix-turn-helix
Other families
T478_0127
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Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
HTH_24
HTH_27
HTH_29
Penicillinase_R
MCM_C
wHTH-PRTase_assc
PadR
PLDc_2
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AJA92909
UniProt:
A0A0A7V1G1
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Position
complement(105611..106378)
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AA seq
255 aa
AA seq
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MSISDKTKKSLEKIGLTSYEIRAYTTLIKDGESNASEISQNSGVPYSKIYEILGTLEEKG
WIGSDDSRPTKYFAKAPSNALETTKQNADTIFSENKNVILSELIPLYEKTGTSEKPDIWF
ISGAMNIVSKIMEMVEHCREEVMIAVPQAGELIVKQALPKLRQLHDKGIKITILISDEFD
KDSIKAISRVADVKVKGGLFGGGIISDKRYVVILLGPEISSSTSSEIVAIWADHAGLAGF
AREYFDFLLKDAKKA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatttctgataaaacaaagaaatcattagagaagattgggttaactagctacgaa
attcgagcttatacaacattaatcaaagatggagaaagtaatgcctcagaaattagtcaa
aattcaggagttccttattcaaaaatttatgagattttaggtacattggaggaaaaggga
tggattggttctgatgattcaagacctacaaaatattttgcaaaagccccatcaaatgca
ttagaaacaacaaaacagaacgcagatactattttttcagaaaacaaaaatgtcatttta
tcagaattaattccactttatgaaaaaaccggtactagtgaaaaaccagatatctggttt
atttccggtgcaatgaacattgtttcaaaaattatggaaatggtcgaacactgtagagaa
gaagtaatgattgcagttccccaagcaggagaattgattgtcaaacaagcacttccaaaa
cttagacaattacacgataaaggaattaaaattacaattctcatctcagatgaatttgat
aaagactctatcaaagcaatttctcgagttgcagatgttaaagtaaaagggggattgttt
ggaggaggcataatttcagataaaagatatgttgtgattttactaggtcctgaaattagt
agctctacttcatcagaaatagtggcaatttgggcagatcatgcaggattagcaggattt
gcaagagaatattttgatttcttattaaaagatgctaaaaaagcataa
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