Candidatus Nitrosopelagicus brevis: T478_0369
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Entry
T478_0369 CDS
T03537
Name
(GenBank) putative type 2 DNA topoisomerase 6 subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbv03032
]
T478_0369
Enzymes [BR:
nbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
T478_0369
DNA replication proteins [BR:
nbv03032
]
Prokaryotic type
DNA Topoisomerases
T478_0369
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AJA92112
UniProt:
A0A0A7UZE9
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All DBs
Position
306338..308206
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AA seq
622 aa
AA seq
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MSSNENFNQISPSEFFYRNRDLAGFSNPTRSLYTAVREFVENSLDACDHSGILPNIHMTI
KAVDPEKPDPKQYILTVKDNGPGIPSKHVPLAFGTVLYGSKFGLKQARGMFGLGATMAIL
YGQITTNKPVKVKSNADGKTRFDFEMKLDIQKNKPVIMKKQETPSTEQGLSVSIVLDGDY
AKAGTKIRDYVYQTSLITPYATISFDDPKGEKFHHKSIIRSMPPAPTVIAPHPYGIDVET
IRRMLVDTHYQIPNVDDKMIEKVRKELGMSKQKFTYNEIMKKTEKKWKSLTRPVRVVIAL
MSFLEADFEKLQRIRIEDVDLRNNKLIYWDYSTSQTLAADMDVESPYYKQLANTVQGESL
THFLTKRFQRVGPTAALEFCKFAKFKPETRVGNMTDQELVKLSDALQTYEGFRSPDPTCL
APLGAEPLEKGIQRRFEPDFMAVVQRTASAYSGFPFVVEMGIAYGGKIETRGTTVYRFAN
RIPLLYDEGSDVVLKVVKDADWNRYKVKSDSAPFIIVSHICSTRVPYKTVGKENVADRPE
IEKELRLALQFLSRKLSGYMSKKGQAEAAKKRANLYSKYLPLVAQFCTELSGKKKEPNYE
KMIKEETAINNTDENKEVEKNG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaacgaaaattttaatcagatatctcctagtgagtttttttatcgtaatcgt
gatcttgcgggatttagtaatcctacgcgttcattgtatactgctgtgcgtgaatttgta
gaaaactctcttgatgcttgtgatcacagtggaatattgcctaatattcacatgacaatc
aaggctgtagatcctgaaaaacctgatcctaaacaatatatcttgactgtaaaagataat
ggtcctggaattccttcaaaacatgtacctcttgcatttggtactgttttgtatggctca
aaatttgggttgaaacaagctcgtggaatgtttggtcttggagctactatggcaatactt
tatggacaaattacaacaaacaaaccagttaaagtaaaaagtaatgcagatggaaaaact
cgttttgattttgagatgaaactcgatattcaaaaaaataaaccagtaataatgaaaaaa
caggaaacaccaagtactgaacaaggattaagcgttagtattgttttagatggtgattat
gcaaaagcaggaacaaaaatccgtgattatgtttaccaaacatcattaatcactccgtat
gcaacaatttcctttgatgatccaaaaggtgagaaatttcatcataaatcaattattcgc
tcaatgcctcctgctccgacagtgattgcacctcatccatacggaattgatgttgagaca
attcgtcggatgcttgttgacacacattatcaaattccaaatgttgatgataaaatgatt
gaaaaagttagaaaagaacttggaatgtcaaaacagaaatttacctataatgaaataatg
aaaaagactgaaaaaaaatggaaatcactcactcgacctgttcgtgttgtaatagctttg
atgtcatttttagaagctgattttgaaaaattacagcgaatcagaattgaagatgttgat
cttagaaataataaactaatctactgggattatagtacatctcaaactctcgcagcagat
atggatgtcgaaagcccttactacaaacaattagcaaatacggttcaaggtgagtctctt
actcactttttaacaaaaagatttcagagagtgggtccaacagctgcacttgaattttgt
aaatttgcaaaattcaaacctgaaactagagttggtaatatgacagaccaagaattagta
aaattaagtgacgcattgcaaacatacgaaggatttagatctcctgaccctacatgttta
gcacctcttggtgcagaacctcttgaaaaaggaattcaacgtagattcgagcctgatttc
atggctgtggttcaaagaactgcctctgcatattctggatttccatttgttgtagaaatg
ggaattgcatatggaggtaaaattgaaacacgtggtactactgtgtatagatttgcaaat
agaattccattgttatatgatgaaggtagtgacgttgtactaaaagttgttaaagatgct
gactggaatcgttacaaagtgaaaagtgattctgcaccatttatcatagtttcacatatt
tgttcaacaagagttccatacaaaacagtaggaaaagaaaatgtggctgataggccagaa
attgaaaaagaacttagattggcgcttcaattcctttcaagaaaactttctggatatatg
tctaaaaaaggccaagcagaggctgcaaagaaacgtgctaacctatattcaaaatatttg
ccacttgtagcacaattttgtacagaattgtctggaaaaaagaaagagccaaattatgaa
aaaatgattaaagaagaaactgcaataaacaatacagatgaaaataaagaggtagaaaag
aatggctaa
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