KEGG   Candidatus Nitrosopelagicus brevis: T478_0394
Entry
T478_0394         CDS       T03537                                 
Name
(GenBank) signal peptide-binding domain protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nbv  Candidatus Nitrosopelagicus brevis
Pathway
nbv02024  Quorum sensing
nbv03060  Protein export
nbv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nbv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    T478_0394
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    T478_0394
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    T478_0394
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nbv02044]
    T478_0394
Enzymes [BR:nbv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     T478_0394
Secretion system [BR:nbv02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   T478_0394
  Eukaryotic Sec-SRP protein
   T478_0394
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_17 MobB MeaB AAA_31 6PF2K Zeta_toxin cobW nSTAND3 ParA MipZ APS_kinase AAA_22 AAA_5 AAA_30 MMR_HSR1 AAA_33 VirC1 AAA_18 KTI12 Thymidylate_kin AAA_16 NTPase_1 ABC_tran Arf TssR_C G-alpha AAA CaM_bdg_C0 NPHP3_N ResIII ATP_bind_1 AAA_7 RuvB_N
Other DBs
NCBI-ProteinID: AJA92800
UniProt: A0A0A7V803
LinkDB
Position
324451..325776
AA seq 441 aa
MLDNLKDGLRTAIKKIVSSSGIDEELIKELAKDVQRSLLQSDVNVKLVLEITKNLQERCI
NETPPPGLSRKDHIVKILYDELSKLLGNDTEFHFKSGKINKVLMLGIQGSGKTTVSSKLA
KFLTKQGYRVGAIGADTYRPGALVQLRTNCEKSNVEVYGEENNKDSAEIVKNGLKHFENS
NIDVVLIDTAGRHKEEKDLLDEMTEISKVSNPDLALLVIDGTIGQQCFSQAEAFNKIVPV
GGIVITKLDSSAKGGGALAASAATGAQVMYVGTGERIDDLEQFSPTRFVGRLLGMGDVQA
VLDLAKRLGDEADEVRMKRISSGKMNMEDFFYQLEEVTKVGSLQSLMETMPGLSGMVKED
QLEVMEQRMDKWRYIIQSMNTKEKADPDLLNSSRIKRIARGSGWPEHEVKELIKNYKNSK
SMMKASKGRQMQGMLRKLGMG
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcttgataatttgaaagacggtttaagaaccgccattaaaaaaatcgtaagctcttct
gggattgatgaagaattaattaaagaattagcaaaagatgtacaacggtcacttttacaa
tctgatgtaaatgtaaaattagttcttgagatcacaaaaaacctacaagaacgatgtatt
aatgaaactcctcctcctgggctgtcacgaaaagatcacattgtaaaaattctttatgat
gaattatcaaaattattaggaaatgatactgagtttcatttcaaatccggaaaaattaac
aaagttttgatgcttggtattcaaggaagtggtaaaactactgtatcatctaaactagca
aaatttcttacaaaacaaggatatcgtgttggtgctattggtgcagatacctacagacct
ggtgccttagttcaattaagaacaaattgtgaaaaatctaatgttgaagtttatggcgaa
gaaaacaacaaagattctgctgaaattgtgaaaaatggtttaaaacattttgaaaattcg
aatattgatgtagtattgattgatactgcaggtcgtcataaagaagaaaaagatcttctt
gatgaaatgactgaaatttccaaagtatctaatcctgatttagcattactagtaattgac
ggtacaattggccaacaatgtttctcgcaagctgaagcatttaacaaaattgttcctgtt
ggaggcatagtcattacaaaacttgatagttctgcaaaaggtggtggtgctctagcagca
tctgctgcaacaggtgcacaagtaatgtatgttggaaccggtgaaagaattgatgattta
gaacagttttcacctactagatttgttggcagacttttgggaatgggtgatgttcaagct
gtgcttgaccttgcaaaaagacttggtgatgaagcagatgaagttcgtatgaaaagaata
tcaagtggtaaaatgaacatggaagatttcttttatcaacttgaggaagttaccaaagtc
ggttcacttcaaagtttaatggaaacaatgcctggattatcaggaatggtaaaagaagat
caacttgaagttatggaacaaagaatggacaaatggagatacattattcagagtatgaat
acaaaagaaaaagctgatcctgatctacttaattcatctagaatcaaaagaattgcacgt
ggttctggttggcctgagcatgaagttaaggaattaataaaaaattataaaaattctaaa
tcaatgatgaaagcatctaaaggaagacaaatgcaaggtatgcttcgtaaacttggaatg
ggttaa

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