Candidatus Nitrosopelagicus brevis: T478_0560
Help
Entry
T478_0560 CDS
T03537
Name
(GenBank) collagen triple helix repeat protein
Organism
nbv
Candidatus Nitrosopelagicus brevis
Brite
Glycosaminoglycan binding proteins [BR:
nbv00536
]
Heparan sulfate / Haparin
Extracellular matrix molecules
T478_0560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
AJA92659
UniProt:
A0A0A7V0U9
LinkDB
All DBs
Position
458866..460137
Genome browser
AA seq
423 aa
AA seq
DB search
MPSSEHFTVKGQSPYKQKNGVFEVEFAITEAKPTSEQIAQKSFLPLWREKSHLNIKNGEF
EVTLGSQSNPLPEKISAFTSVWIIVVDQFSSVGSSFEFQVPETMRQAPPPKPDSEQKKSK
QVPRSSSAGVKGPPGQPGPEGDKGDKGDKGAPGDKGPTGQKGVTGDKGDKGDKGPPGLKG
DKGDKGEKGLTGDKGDKGEQGGRGLIGDKGGTGPQGPSGDKGLTGLRGDKGEKGPTGPPG
VQGDKGVPGSVGERGDKGVTGPMGEKGPTGPQGPQGEKGKIGITGPIGEKGPRGPQGPPG
DKGITGVPGPQGDRGTIGPQGEQGPPGLTGEKGPRGPQGIQGPQGEQGKQGLQGPPGDKG
SQGPQGSVGEKGPRGPPGPPGEKGPTGGMSEEQKQLFKDMLDILVRKGIISAEEQIELQS
HLY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcatctgaacattttactgttaaaggtcaatctccatacaagcaaaaaaacggc
gtctttgaggtagaatttgctatcactgaagccaaacctaccagtgaacaaattgctcaa
aaatcctttcttccactatggagagaaaaatctcatctcaacataaaaaatggagaattt
gaagtaacattaggctctcaatcaaatcccttacctgaaaaaatttctgcattcactagc
gtttggattatagttgttgatcaattctcatctgttggttcttcatttgaatttcaagta
cctgaaacaatgagacaggctcctccaccaaaacctgattcagaacaaaaaaaatcaaaa
caggtgccacgctcttctagtgctggcgtaaaaggtcctcctggtcaacctggtcctgaa
ggagacaaaggagacaaaggagacaaaggtgctcctggagacaaaggtccaacaggacaa
aaaggagttaccggagacaaaggtgacaaaggtgacaaaggtcctcctggtctaaaagga
gacaaaggagacaaaggagaaaaaggtctaacaggtgacaaaggtgacaaaggagaacaa
ggtggtcgtggattaattggtgacaaagggggcactggtccacaaggtccatctggcgat
aaaggattaactggtttacgcggtgacaaaggagaaaaaggtcctactggtccacctggt
gttcaaggcgacaaaggagttcctggctctgttggtgaaagaggtgacaaaggtgtcact
ggtccaatgggagaaaaaggtcctactggtccacaaggtccacaaggagaaaaaggtaag
attggaattactggtcctattggagaaaaaggtccacgcggtccacaaggtcctcctggt
gacaaaggaataactggtgtacctggtccacaaggcgaccgcggaacaattggtccacaa
ggtgaacaaggccctcctggtctaactggagaaaaaggtccacgcggtccacaaggaatt
caaggtccacaaggtgaacaaggaaaacaaggtttgcaaggccctcctggtgacaaaggc
tcacagggtccacaaggttctgttggagaaaaaggtccacgcggtccacctggccctcct
ggagaaaaaggtccaaccggtggaatgtcagaagaacaaaagcaactgttcaaagatatg
cttgatattttagttagaaaaggaataatatctgcagaagaacaaatcgaattacaaagt
catttgtattag
DBGET
integrated database retrieval system
