Candidatus Nitrosopelagicus brevis: T478_0599
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Entry
T478_0599 CDS
T03537
Name
(GenBank) putative transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
T478_0599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbv03021
]
T478_0599
Transcription machinery [BR:
nbv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
T478_0599
Prokaryotic type
Archaeal type
TFB
T478_0599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
MarR_2
Rrf2
RB_B
HTH_IclR
HTH_6
Cyclin_N
YtxK_like
DUF4143
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
AJA92038
UniProt:
A0A0A7UZK1
LinkDB
All DBs
Position
complement(497415..498413)
Genome browser
AA seq
332 aa
AA seq
DB search
MNKDSESNDHICNNSKCKDVLLVTDSTTGEVMCSSCGQVVSQNMAELGPESAQSGEDYMS
KSRTGRKSTLAFNDMGLSTVIQQSDKDATGKNLSGEMKRTFYRLRMWDKNSKAMPGHRNM
QKAFTLLEGLKAKLSLSDAAVEQAAYIYRKTLAKKIGRGRSIPVILSACVYASCRFTNTP
RTIQDVAEATNLRRTSIHRIYRMLVRDLDLTLETYNPVSFITRITTEVGATEKTKRDAIK
FLIKAEELMITSGKNPVAMAATVVYLAAITNGEKVSQTQVSKAANISSVTIRNLCKKLKD
AKIASFSNPKLTKVVKNDETYNVATRLKVKKD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagattctgaatccaacgatcacatttgtaacaacagtaagtgtaaagatgtt
ctcttagtaactgacagtacaactggagaagtgatgtgctcatcatgtggccaagttgta
tcacaaaatatggcagagttaggtccagagtcagcccagtctggcgaagattatatgtca
aaatcaagaacaggaagaaaatccacacttgcatttaatgacatgggattatccacagtg
attcagcaatcagacaaagatgcaacaggtaaaaatcttagtggagaaatgaagagaaca
ttttaccgactacgaatgtgggataagaacagcaaggctatgccaggtcatagaaatatg
caaaaagcattcacacttttggaaggactcaaagcaaaactatcactttcagatgcagca
gtagaacaggcagcatacatttacagaaagacattggcaaagaaaattggaagaggcaga
agtattcccgtaatcttaagtgcatgtgtatacgcatcatgccgattcacaaacacacca
agaaccattcaagatgttgccgaagcaacaaatctccgaagaacaagcatacatagaatt
tacaggatgttagtaagagatcttgatttaacacttgagacgtataacccagtgagcttt
atcacaagaattactacagaggtaggcgctacagaaaaaaccaaacgagatgcaataaaa
tttctgattaaagcagaagaattgatgataacaagcggtaagaatccggttgcaatggct
gcaacggtagtatatcttgcagcaataacaaatggcgaaaaagtttcacaaactcaagta
tcaaaggctgcaaatatcagtagcgtgacaatacgaaacctctgcaaaaaactcaaagat
gcaaagattgcatcattctcaaatcctaaattaaccaaggtagtgaaaaatgatgaaacg
tacaacgttgctacaagattaaaagtaaagaaagattag
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